SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N15
         (536 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S45630-1|AAB23453.1|  175|Homo sapiens alpha B-crystallin protein.     31   2.6  
M28638-1|AAA52104.1|  175|Homo sapiens protein ( Human alpha-B-c...    31   2.6  
BT006770-1|AAP35416.1|  175|Homo sapiens crystallin, alpha B pro...    31   2.6  
BC007008-1|AAH07008.1|  175|Homo sapiens crystallin, alpha B pro...    31   2.6  
AF007162-1|AAC19161.1|  194|Homo sapiens unknown protein.              31   2.6  
X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein.            30   4.5  
U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein.       30   4.5  
BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein.    30   4.5  
BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein.    30   4.5  
BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein.        30   4.5  
BC006531-1|AAH06531.2|  807|Homo sapiens NOMO3 protein protein.        30   4.5  

>S45630-1|AAB23453.1|  175|Homo sapiens alpha B-crystallin protein.
          Length = 175

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 84  PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 254
           PF P H  +RL   +FGE + ++  F +  S     LR    + A  +  F T  S  + 
Sbjct: 13  PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69

Query: 255 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 374
           +E + + V + +  F  +++ VK    ++ V   H+   D
Sbjct: 70  LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109


>M28638-1|AAA52104.1|  175|Homo sapiens protein ( Human
           alpha-B-crystallin gene, 5' end. ).
          Length = 175

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 84  PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 254
           PF P H  +RL   +FGE + ++  F +  S     LR    + A  +  F T  S  + 
Sbjct: 13  PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69

Query: 255 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 374
           +E + + V + +  F  +++ VK    ++ V   H+   D
Sbjct: 70  LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109


>BT006770-1|AAP35416.1|  175|Homo sapiens crystallin, alpha B
           protein.
          Length = 175

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 84  PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 254
           PF P H  +RL   +FGE + ++  F +  S     LR    + A  +  F T  S  + 
Sbjct: 13  PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69

Query: 255 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 374
           +E + + V + +  F  +++ VK    ++ V   H+   D
Sbjct: 70  LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109


>BC007008-1|AAH07008.1|  175|Homo sapiens crystallin, alpha B
           protein.
          Length = 175

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 84  PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 254
           PF P H  +RL   +FGE + ++  F +  S     LR    + A  +  F T  S  + 
Sbjct: 13  PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69

Query: 255 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 374
           +E + + V + +  F  +++ VK    ++ V   H+   D
Sbjct: 70  LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109


>AF007162-1|AAC19161.1|  194|Homo sapiens unknown protein.
          Length = 194

 Score = 31.1 bits (67), Expect = 2.6
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
 Frame = +3

Query: 84  PFHPEHHHNRLRSPYFGEDVFDTGRFWSELSSE---LRELDNMLADFYRKFPTPASSSQG 254
           PF P H  +RL   +FGE + ++  F +  S     LR    + A  +  F T  S  + 
Sbjct: 13  PFFPFHSPSRLFDQFFGEHLLESDLFPTSTSLSPFYLRPPSFLRAPSW--FDTGLSEMR- 69

Query: 255 IEGNEYKVTIPLTSFDEKDIVVKARTGLLMVQAVHKYEGD 374
           +E + + V + +  F  +++ VK    ++ V   H+   D
Sbjct: 70  LEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQD 109


>X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein.
          Length = 1190

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 182 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 96
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 771 LEGQIHPELEGVEIVISEKGASSPLITVF 799


>U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein.
          Length = 1148

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 182 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 96
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831


>BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein.
          Length = 1222

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 182 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 96
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831


>BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein.
          Length = 1222

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 182 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 96
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831


>BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein.
          Length = 1100

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 182 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 96
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 636 LEGQIHPELEGVEIVISEKGASSPLITVF 664


>BC006531-1|AAH06531.2|  807|Homo sapiens NOMO3 protein protein.
          Length = 807

 Score = 30.3 bits (65), Expect = 4.5
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 182 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 96
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 388 LEGQIHPELEGVEIVISEKGASSPLITVF 416


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,706,270
Number of Sequences: 237096
Number of extensions: 1588975
Number of successful extensions: 4346
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4346
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5273648886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -