Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N14
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF045642-4|AAK67210.1|  226|Caenorhabditis elegans Vacuolar h at...   138   4e-33
U20864-11|AAV58867.1|  583|Caenorhabditis elegans C. elegans ADA...    29   2.0  
U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA...    29   2.0  
AF016672-5|AAB66120.1|  951|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF016672-4|AAD47126.1|  968|Caenorhabditis elegans Hypothetical ...    29   3.4  

>AF045642-4|AAK67210.1|  226|Caenorhabditis elegans Vacuolar h
           atpase protein 8 protein.
          Length = 226

 Score =  138 bits (333), Expect = 4e-33
 Identities = 74/179 (41%), Positives = 98/179 (54%)
 Frame = +2

Query: 11  MALSDADVQKQIKHMMAFIEQXXXXXXXXXXXXXXXXFNIEKGRLVQQQRLKIMXXXXXX 190
           M +SD DVQKQ++HMMAFIEQ                FNIEKGRLVQQQR KIM      
Sbjct: 1   MGISDNDVQKQLRHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQRQKIMEFFEKK 60

Query: 191 XXXXXXXXXIQSSNMLNQARLKVLKVREDHVRNVLDEARKRLAEVPKDTKLYSDLLTTLI 370
                    IQ+SN LN  RL+ LK REDH+  VLDEAR  L+ +  D   Y  +L  L+
Sbjct: 61  EKQVELQRKIQASNSLNAGRLRCLKAREDHIGAVLDEARSNLSRISGDAARYPAILKGLV 120

Query: 371 VQALFQLMEPSVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTCG 547
           +Q L QL+E  V +R R+ D   VE +L       + +    T++ +D ++FL  ++ G
Sbjct: 121 MQGLLQLLEKEVVLRCREKDLRLVEQLLPECLDGLQKEWGSTTKVVLDKQNFLPSESAG 179



 Score = 29.9 bits (64), Expect = 1.5
 Identities = 13/20 (65%), Positives = 17/20 (85%)
 Frame = +3

Query: 549 GVDLVAARGRIKISNTLESR 608
           GV+L A  G+IK+S+TLESR
Sbjct: 180 GVELSARAGKIKVSSTLESR 199


>U20864-11|AAV58867.1|  583|Caenorhabditis elegans C. elegans ADA-2
           protein, isoform b protein.
          Length = 583

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 395 EPSVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTC 544
           +P + I+V+QV +  V+ ++     D +TK ++   L    E+ LSPD C
Sbjct: 173 DPKLAIKVQQVLEQYVQKVI---DGDIETKYERPKFLTNQYETELSPDDC 219


>U20864-10|AAK68355.1|  596|Caenorhabditis elegans C. elegans ADA-2
           protein, isoform a protein.
          Length = 596

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 16/50 (32%), Positives = 28/50 (56%)
 Frame = +2

Query: 395 EPSVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTC 544
           +P + I+V+QV +  V+ ++     D +TK ++   L    E+ LSPD C
Sbjct: 186 DPKLAIKVQQVLEQYVQKVI---DGDIETKYERPKFLTNQYETELSPDDC 232


>AF016672-5|AAB66120.1|  951|Caenorhabditis elegans Hypothetical
           protein F56D12.6b protein.
          Length = 951

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/51 (29%), Positives = 32/51 (62%)
 Frame = +2

Query: 392 MEPSVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTC 544
           ++    + V+++ K  VE  +ARA+++YK+ + K   ++ D E+ +S D+C
Sbjct: 137 VKKETNVNVKEISK--VELKVARAREEYKSYVDKYELVREDFETKMS-DSC 184


>AF016672-4|AAD47126.1|  968|Caenorhabditis elegans Hypothetical
           protein F56D12.6a protein.
          Length = 968

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 15/51 (29%), Positives = 32/51 (62%)
 Frame = +2

Query: 392 MEPSVTIRVRQVDKSQVESILARAQQDYKTKIKKDTQLKVDTESFLSPDTC 544
           ++    + V+++ K  VE  +ARA+++YK+ + K   ++ D E+ +S D+C
Sbjct: 154 VKKETNVNVKEISK--VELKVARAREEYKSYVDKYELVREDFETKMS-DSC 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,713,476
Number of Sequences: 27780
Number of extensions: 214905
Number of successful extensions: 622
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)