Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N11
         (483 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861     28   3.4  
02_05_0008 + 24934917-24935229,24936387-24936608,24936876-249375...    28   4.5  

>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
          Length = 158

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 217 KHRRGEIYYNFYQQLTTRLFTSSG 288
           + RRG   Y+ Y ++ TRLFT SG
Sbjct: 128 RRRRGRFLYSPYWKVDTRLFTFSG 151


>02_05_0008 +
           24934917-24935229,24936387-24936608,24936876-24937591,
           24937646-24937728,24938448-24938514,24938833-24939228,
           24939276-24939318,24939380-24939474,24940287-24940314,
           24940636-24940754
          Length = 693

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 109 EQRLTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKH 222
           E+ + +    IG   Y  Y   + PF       GNLKH
Sbjct: 281 EESIHFFMRSIGLREYSRYLCFNFPFTHEKSLLGNLKH 318


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,615,735
Number of Sequences: 37544
Number of extensions: 249000
Number of successful extensions: 584
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 584
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)