BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= I10A02NGRL0003_N11 (483 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.6 SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.1 SB_49621| Best HMM Match : 7tm_1 (HMM E-Value=6e-12) 27 6.1 SB_28946| Best HMM Match : Occludin_ELL (HMM E-Value=0.27) 27 6.1 SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0) 27 6.1 SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22) 27 8.1 SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30) 27 8.1 >SB_41743| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1436 Score = 27.9 bits (59), Expect = 4.6 Identities = 19/72 (26%), Positives = 34/72 (47%) Frame = +1 Query: 25 AINYGIVKEEEQYVYYANYSNTFLYNNEEQRLTYLTEDIGFNSYYYYFHSHLPFWWSSER 204 A+ + I ++ Y+YYA + YNN LTY+ N+ + + + L ++ Sbjct: 822 ALKWAITEKFRDYLYYAPSFTVYTYNNP---LTYILTTAKLNATGHRWVAEL-----ADY 873 Query: 205 YGNLKHRRGEIY 240 +K+R G IY Sbjct: 874 NFTIKYRPGRIY 885 >SB_52295| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1325 Score = 27.5 bits (58), Expect = 6.1 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +2 Query: 380 FPIRFKAGQLPSTQRKELRSNTVLGPF*KDFRT 478 F R+ LP T+ + + S VLGPF FRT Sbjct: 1160 FSHRYTVKHLPDTE-ENMMSQRVLGPFESSFRT 1191 >SB_49621| Best HMM Match : 7tm_1 (HMM E-Value=6e-12) Length = 316 Score = 27.5 bits (58), Expect = 6.1 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -1 Query: 87 VGIVGVIHILLFLFYNSIINSLCIVKNTV 1 VG + + +ILLF +I ++C+V NTV Sbjct: 168 VGFLALNNILLFKVVGCVIITICLVLNTV 196 >SB_28946| Best HMM Match : Occludin_ELL (HMM E-Value=0.27) Length = 396 Score = 27.5 bits (58), Expect = 6.1 Identities = 13/23 (56%), Positives = 14/23 (60%) Frame = +2 Query: 269 VYLLRAVLQTGWGPILEFSWVLG 337 V L A QT WG ILEFS+ G Sbjct: 174 VTLREAAKQTNWGRILEFSYRYG 196 >SB_55657| Best HMM Match : EGF_CA (HMM E-Value=0) Length = 868 Score = 27.5 bits (58), Expect = 6.1 Identities = 15/37 (40%), Positives = 18/37 (48%) Frame = +3 Query: 372 PYYFPFGSRPDNYHLHSVKNYEAIRFLDLFEKTFVQS 482 PY FP G PDN +L + E I D+ TF S Sbjct: 824 PYGFPGGGDPDNMYLPQEDDDEMIGSYDVEGATFDNS 860 >SB_26631| Best HMM Match : ig (HMM E-Value=1.6e-22) Length = 1123 Score = 27.1 bits (57), Expect = 8.1 Identities = 13/59 (22%), Positives = 26/59 (44%) Frame = +1 Query: 43 VKEEEQYVYYANYSNTFLYNNEEQRLTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLK 219 ++ +Q++ A + TF+Y+ E+ D + Y H L FW + N++ Sbjct: 644 IENLKQFIVQARFVETFVYDMTEKPGKCAIRDRERKTISYNDHRFLVFWTDFQNTNNMR 702 >SB_22838| Best HMM Match : Arrestin_N (HMM E-Value=1.1e-30) Length = 173 Score = 27.1 bits (57), Expect = 8.1 Identities = 11/43 (25%), Positives = 17/43 (39%) Frame = +1 Query: 118 LTYLTEDIGFNSYYYYFHSHLPFWWSSERYGNLKHRRGEIYYN 246 + Y E + F S + FH W H+ E+Y+N Sbjct: 29 VVYSKESLKFRSVHVEFHGEARTNWDEMENYTTTHKNEEVYFN 71 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 15,006,711 Number of Sequences: 59808 Number of extensions: 310625 Number of successful extensions: 687 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 630 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 680 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1013948003 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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