Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N10
         (615 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   0.84 
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   0.84 
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    24   3.4  
EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.       23   5.9  
AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    23   5.9  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 26.2 bits (55), Expect = 0.84
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 351  YLAYRQPVNVIAAIISVWQLLLLAPS-KNNLASG 449
            Y  Y +PVN +  +     LLL+AP+   N+ASG
Sbjct: 3140 YTPYIRPVNYLDQLNGTLTLLLVAPTVVRNIASG 3173


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 26.2 bits (55), Expect = 0.84
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 351  YLAYRQPVNVIAAIISVWQLLLLAPS-KNNLASG 449
            Y  Y +PVN +  +     LLL+AP+   N+ASG
Sbjct: 3143 YTPYIRPVNYLDQLNGTLTLLLVAPTVVRNIASG 3176


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 16/50 (32%), Positives = 21/50 (42%)
 Frame = -1

Query: 150 ATLVAVHVYSPSSFTSI*SNFRTLCGCICAYVANGLPPLLLHVTSGSGYP 1
           A L  + VY P   +S  S  R+L  CI ++     P  LL V      P
Sbjct: 181 AHLYVMVVYIPPQLSSEISTLRSLHDCISSFTLRLKPSDLLFVIGDFNQP 230


>EF034031-1|ABK32002.1|   70|Anopheles gambiae serpin 4A protein.
          Length = 70

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -1

Query: 309 TLVLIETIGSGYPFALHS 256
           T  LI+ IGSGY F + S
Sbjct: 29  TAALIDRIGSGYSFLVDS 46


>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 14/51 (27%), Positives = 18/51 (35%)
 Frame = +2

Query: 419 GTVEEQFGIRVDRGDGGDTVFXXXXXXXXXXXXXPVGPTDQTPSDYDHRPG 571
           G V    GIR++RG  G+  +               G  D  PS     PG
Sbjct: 655 GDVRNYLGIRIERGQNGE--YLLDQASYIRRIAKRFGQEDARPSRIPMDPG 703


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,562
Number of Sequences: 2352
Number of extensions: 13781
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)