Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N09
         (602 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_19131| Best HMM Match : No HMM Matches (HMM E-Value=.)             213   7e-56
SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18)                   28   5.1  
SB_9978| Best HMM Match : Pkinase (HMM E-Value=3.4e-17)                28   5.1  
SB_38738| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.7  
SB_7154| Best HMM Match : bZIP_1 (HMM E-Value=2)                       27   8.8  

>SB_19131| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 456

 Score =  213 bits (521), Expect = 7e-56
 Identities = 99/160 (61%), Positives = 123/160 (76%)
 Frame = -3

Query: 576 LKEYESIGRKLPSETEPRPPLYQMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVSIKE 397
           LKE++ IGR +P++    PPLY+MRIF+PD +VA+S+FWYF+ QLK+ KK+ GEIVS ++
Sbjct: 207 LKEFQVIGRLMPNKKLTVPPLYKMRIFAPDDVVARSKFWYFISQLKRMKKSQGEIVSCQQ 266

Query: 396 IPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 217
           I EK P++IKNFGIWLRY+SRSG HNMYREYRDL+V GAVT CYRDM ARHRAR +SIQI
Sbjct: 267 IYEKKPLQIKNFGIWLRYDSRSGTHNMYREYRDLTVSGAVTACYRDMAARHRARGYSIQI 326

Query: 216 IKVEVIKAAACRRPQVKQFHTSKIGFPLPKRVHQYKRLNT 97
           +KVEVI A+  RRP VKQ H   +  P      Q   L+T
Sbjct: 327 MKVEVIPASKARRPHVKQMHVYGV-LPYFANFRQLAELST 365


>SB_53143| Best HMM Match : PKD (HMM E-Value=2.7e-18)
          Length = 2111

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 382 TLFWNFLDGYNFTSSL 429
           T+FW+FLDG N T  L
Sbjct: 603 TMFWDFLDGNNLTQEL 618


>SB_9978| Best HMM Match : Pkinase (HMM E-Value=3.4e-17)
          Length = 348

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -2

Query: 136 ATKTRSPIQASQYLCIQEAEHVLYVI 59
           A KTR P   + + C Q  EHV +V+
Sbjct: 227 ANKTRHPFLVNLFACFQTQEHVCFVM 252


>SB_38738| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 210

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +1

Query: 400 LDGYNFTSSLFELLQLPQEIPET-RFCHNRIRRENPHL 510
           L+ +NF+S + E+  + +++P + R C+  ++ E PHL
Sbjct: 114 LESFNFSSPVEEMENMQKQLPASKRLCYTPLKSE-PHL 150


>SB_7154| Best HMM Match : bZIP_1 (HMM E-Value=2)
          Length = 287

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
 Frame = -3

Query: 597 EVKAKGELK-----EYESIGRKLPSETEPRPPLYQMRIFSPDPIVAKSRFWYFLRQLKKF 433
           +V  K ELK     ++E +G +LP     RPP  Q R      +V + R       +K  
Sbjct: 205 KVDVKRELKTCIKTKFEEMGIQLPKVEYKRPPTPQPRPPEKPEVVEQRRRQNKFAAMKSR 264

Query: 432 KKTTGEIVSIKEI 394
           KK T  I  ++++
Sbjct: 265 KKRTERINRLRQV 277


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,621,043
Number of Sequences: 59808
Number of extensions: 383166
Number of successful extensions: 1277
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)