Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N09
         (602 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           27   0.47 
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    25   1.9  
AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase...    23   5.8  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 27.1 bits (57), Expect = 0.47
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -1

Query: 167  SNSTPARSVSRYQNAFTNT 111
            SNSTP+RSV+R   +FT++
Sbjct: 1318 SNSTPSRSVARIVTSFTDS 1336


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -3

Query: 351 LRYESRSGVHNMYREYRDLSVG 286
           L  E+ +GVHN+Y+ +R+  +G
Sbjct: 153 LSEETTTGVHNLYKMFREGRLG 174


>AY280613-1|AAQ21366.1|  257|Anopheles gambiae carbonic anhydrase
           alternate isoform protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 430 FELLQLPQEIPETRFCHN 483
           F  +Q+PQ++PE  F  N
Sbjct: 231 FRSVQVPQQVPEVVFVRN 248


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,343
Number of Sequences: 2352
Number of extensions: 13969
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58450473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)