Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N07
         (467 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical...    67   5e-12
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (...    29   1.7  
AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical ...    28   2.9  
Z68337-9|CAA92751.2|  334|Caenorhabditis elegans Hypothetical pr...    28   3.8  
Z83218-1|CAB05686.1|  282|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>AL132860-19|CAB60502.1|  159|Caenorhabditis elegans Hypothetical
           protein Y56A3A.21 protein.
          Length = 159

 Score = 67.3 bits (157), Expect = 5e-12
 Identities = 37/104 (35%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +1

Query: 133 ILLTFAYISRGIAESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPENYALYAE 312
           I +    ++  +   C++PK  A+SF++ D     +  +ITEF+L+C N  P+N    AE
Sbjct: 4   IAVALCLVASALCAKCESPKYSASSFSTTDGFFHYKTTFITEFTLQCSNN-PKNIQYTAE 62

Query: 313 VDEKPLTAARVGEN-KYQVSWTEEPAKARSGVHEINILDEEGWA 441
           V+ + +  +   E  K+QVSWT E   A +    INI DEEG A
Sbjct: 63  VNGRLIPVSISDETAKFQVSWTLEHKDAGAQTFNINIFDEEGAA 106


>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
           (drosophila peroxidase)homolog protein 1 protein.
          Length = 1285

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 17/45 (37%), Positives = 21/45 (46%)
 Frame = +1

Query: 256 EFSLKCDNPLPENYALYAEVDEKPLTAARVGENKYQVSWTEEPAK 390
           E  + C NP+   +    EVD+  LT AR  E     SWT E  K
Sbjct: 202 EKKVYCTNPVELRHQALDEVDDSALTCARPAEE----SWTGEEIK 242


>AC024807-1|AAF59529.5|  704|Caenorhabditis elegans Hypothetical
           protein Y53G8AL.1 protein.
          Length = 704

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 19/71 (26%), Positives = 28/71 (39%)
 Frame = +1

Query: 169 AESCQNPKVEATSFTSLDATVVTQIAYITEFSLKCDNPLPENYALYAEVDEKPLTAARVG 348
           A+  QNP+++     SLD    T+   I E S   +    EN     E  EK      + 
Sbjct: 276 AKPAQNPEIDLPEVPSLDLEETTENPEIPEISTPREEDSAENLENLVENSEKSEILEDLE 335

Query: 349 ENKYQVSWTEE 381
           EN   ++   E
Sbjct: 336 ENSKNLTENSE 346


>Z68337-9|CAA92751.2|  334|Caenorhabditis elegans Hypothetical
           protein M7.13 protein.
          Length = 334

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 121 IPIVILLTFAYISRGIAESCQNPKVEATSFTSLD 222
           IP+ I+ TFA++  G+   C    +  + + +LD
Sbjct: 270 IPVTIIYTFAFMGHGMGTICGIASITISMYPALD 303


>Z83218-1|CAB05686.1|  282|Caenorhabditis elegans Hypothetical
           protein C31A11.4 protein.
          Length = 282

 Score = 26.6 bits (56), Expect = 8.9
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +3

Query: 123 TNCYFTYFCLYKSRNRRELPKS*SRSYLIYKFRRYSCNSNSLYY 254
           T+CYF  F L+     + +P   S S + YK    +  + SL++
Sbjct: 17  TSCYFNVFILFSILYLKRIPVKSSMSLIYYKLGIDAFYTLSLFF 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,087,494
Number of Sequences: 27780
Number of extensions: 200284
Number of successful extensions: 462
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)