Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N07
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    25   0.54 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   0.94 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    24   0.94 
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   5.0  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.0  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    21   6.6  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    21   6.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.6  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   8.7  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 24.6 bits (51), Expect = 0.54
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 112 MNKIPIVILL-TFAYISRGIAESCQNPKVEATSFTSLDATV 231
           M+K+P  +   T +YI R   E  QNPKV    F +  AT+
Sbjct: 531 MSKLPKTVRTPTDSYI-RSFFELLQNPKVSNEQFLNTAATL 570


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 133  ILLTFAYISRGIAESCQNPKVEATSFTSLDA 225
            +L +F Y    + E C +P   ATS  S+ +
Sbjct: 1736 LLHSFMYHEHAMTEGCASPPPAATSMKSVSS 1766


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 133  ILLTFAYISRGIAESCQNPKVEATSFTSLDA 225
            +L +F Y    + E C +P   ATS  S+ +
Sbjct: 1732 LLHSFMYHEHAMTEGCASPPPAATSMKSVSS 1762


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 364 PDTYFLQLEPL 332
           PDT F+QL PL
Sbjct: 152 PDTKFIQLPPL 162


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 364 PDTYFLQLEPL 332
           PDT F+QL PL
Sbjct: 152 PDTKFIQLPPL 162


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 74  LNSHTYYRRQRS*LENSKKYYYN 6
           ++S+ Y  +  +   NSKK YYN
Sbjct: 304 ISSNNYNYKNYNNNYNSKKLYYN 326


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 74  LNSHTYYRRQRS*LENSKKYYYN 6
           ++S+ Y  +  +   NSKK YYN
Sbjct: 315 ISSNNYNYKNYNNNYNSKKLYYN 337


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 184  FGSSLRFLDLYRQK 143
            FG   R LDLYRQ+
Sbjct: 1006 FGCRQRNLDLYRQE 1019


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 56  NTCVNLIYSVINI 94
           N C  L Y++INI
Sbjct: 349 NNCKKLYYNIINI 361


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,929
Number of Sequences: 438
Number of extensions: 2540
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)