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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N06
         (313 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy...    28   0.37 
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||...    25   2.6  
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo...    25   2.6  
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po...    25   3.5  
SPBC1271.09 |||glycerophosphodiester transporter|Schizosaccharom...    24   4.6  
SPBC1773.08c |||mannosyltransferase complex subunit |Schizosacch...    24   4.6  
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac...    24   4.6  
SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces ...    24   4.6  
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom...    24   4.6  
SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6 family|Schi...    24   4.6  
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex...    24   4.6  
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|...    24   6.1  
SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|c...    23   8.1  
SPBC11C11.02 |imp2||contractile ring protein Imp2|Schizosaccharo...    23   8.1  

>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 4924

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +2

Query: 143  LSIAVAKYITISTNN*QHVITSSVLQTAWVPYLNSLG 253
            LSI+ AK  TI  +  +  + S++L T+W+ +LNS+G
Sbjct: 3546 LSISSAKLSTICRSVLKASVNSALL-TSWICFLNSIG 3581


>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 557

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 172 NFYQQLTTRYYFERLTNGLGSIPEF 246
           NFY  +    YF   T G+ S+P F
Sbjct: 126 NFYPPIQNSTYFINATGGIDSMPYF 150


>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
           3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 925

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = +1

Query: 103 HLPFWWSSERYGNLKHRRGEI-YYNFYQQLTTRYYFERLTNGLGSIPEFSWYSP 261
           H  FWWS  +  NL     E+   NF   L     FE   N +    EFS  SP
Sbjct: 118 HQKFWWSLRKKRNLPKENSELDLSNFQDDLD----FE---NSISQKNEFSQKSP 164


>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 743

 Score = 24.6 bits (51), Expect = 3.5
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +1

Query: 28  NNEEQRLTYLTEDIGFNSYYYYFHSHL 108
           + + Q++ Y+ ++   NSY  Y HSH+
Sbjct: 313 SRKTQKIHYINDNDPSNSYSSYQHSHV 339


>SPBC1271.09 |||glycerophosphodiester
           transporter|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 543

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 61  EDIGFNSYYYYFHSHLPFWWSSERYG 138
           +DIG  +Y       L F W S+R+G
Sbjct: 118 QDIGMIAYVGTIVGQLSFGWYSDRFG 143


>SPBC1773.08c |||mannosyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 391

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
 Frame = +1

Query: 115 WWSSERYGNLKHRRGEIYYNFYQQL--TTRYYFER 213
           +WS+    N K  R E Y NF++ +  T  ++ ER
Sbjct: 282 FWSNFEIANFKFFRNEQYENFFRTMDATGGFWTER 316


>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
            Spp42|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 2363

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 88   YYFHSHLPFWWSSERY 135
            Y    + PFWW+S+R+
Sbjct: 1469 YQLLKNNPFWWTSQRH 1484


>SPBC3D6.02 |but2||But2 family protein But2 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 390

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +1

Query: 31  NEEQRLTYLTEDIGF-NSYYYYFHSHLPFWWSSE 129
           N + +  YLT D+ +  S YYY    L F +++E
Sbjct: 256 NGQNQSVYLTYDVPYGRSLYYYTSCALEFRFTNE 289


>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 204

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 229 GSIPEFSWYSPIKTGYYPLMTSYYFP 306
           G  P+  +Y P +  YYP   +Y  P
Sbjct: 107 GGYPQQPYYYPNQPNYYPAQPAYAQP 132


>SPBC1306.02 ||SPBC4.08|WD repeat protein, human WDR6
            family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 984

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1

Query: 208  RSNNVLLIVGRNCNIFRHG 152
            R+N+ L+I G  C +FR G
Sbjct: 963  RNNDFLIIYGIGCEVFRLG 981


>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
           subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 342

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
 Frame = -2

Query: 303 EIV*SHQGIVTSLNR-----RVPREFRYGTQAVCKTLEVITC 193
           E V SH+ I+++L +     RVP    YG     KT  ++ C
Sbjct: 35  EDVVSHKDIISTLEKFISSNRVPHMLFYGPPGTGKTSTILAC 76


>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 554

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +1

Query: 202 YFERLTNGLGSIPEFSWYSP 261
           YF+     LG+   F WY P
Sbjct: 349 YFDNSLENLGNYNSFIWYGP 368


>SPAPB1E7.08c |||membrane transporter|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 554

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = +1

Query: 4   NYSNTFLYNNEEQRLTYLTEDIGFNSYYYYFHSHLPFWWSSE 129
           ++S T+L  +  + L+    +IGF  Y +Y      F W S+
Sbjct: 53  DFSKTYLAKS--RILSNAMNEIGFGRYQWYLFFVAGFGWMSD 92


>SPBC11C11.02 |imp2||contractile ring protein
           Imp2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 670

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 115 WWSSERYGNLKHRRGEIYYNFYQQL 189
           WW     G   H RG+   NF +++
Sbjct: 644 WWEGFVVGEDDHNRGQFPSNFVREI 668


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,278,660
Number of Sequences: 5004
Number of extensions: 23798
Number of successful extensions: 79
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 79
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 81889040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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