Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_N04
(345 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86; Eukary... 145 2e-34
UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42; Eutele... 113 8e-25
UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3; ... 93 1e-18
UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7; Dikar... 91 6e-18
UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1; ... 71 5e-12
UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor; ... 70 1e-11
UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8; Trypano... 67 7e-11
UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4; Apicomp... 66 2e-10
UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato... 63 1e-09
UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba h... 58 5e-08
UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S riboso... 53 1e-06
UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148, w... 45 3e-04
UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4; Pyroba... 38 0.046
UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;... 33 0.98
UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1; Hypert... 33 1.3
UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1; Auran... 33 1.7
UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n... 33 1.7
UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropy... 32 2.3
UniRef50_UPI0000ECA23F Cluster: UPI0000ECA23F related cluster; n... 32 3.0
UniRef50_Q1D826 Cluster: Patatin-like phospholipase family prote... 31 4.0
UniRef50_A1RH83 Cluster: Putative uncharacterized protein; n=4; ... 31 4.0
UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|... 31 4.0
UniRef50_P84634 Cluster: Dicer-like protein 4; n=1; Arabidopsis ... 31 4.0
UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S riboso... 31 5.3
UniRef50_Q5TJB1 Cluster: Putative uncharacterized protein; n=3; ... 31 5.3
UniRef50_Q3XXC9 Cluster: Regulatory protein, GntR:Bacterial regu... 31 5.3
UniRef50_Q1GKZ5 Cluster: Transcriptional regulator GntR family; ... 31 5.3
UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillar... 31 5.3
UniRef50_Q6MWI4 Cluster: B1159F04.16 protein; n=3; Oryza sativa|... 31 5.3
UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.0... 31 5.3
UniRef50_A3LS16 Cluster: Predicted protein; n=2; Saccharomycetac... 31 5.3
UniRef50_P13185 Cluster: Protein kinase KIN1; n=2; Saccharomyces... 31 5.3
UniRef50_A4EQ79 Cluster: Transcriptional regulatory protein; n=1... 31 6.9
UniRef50_Q5ZQV9 Cluster: Putative uncharacterized protein; n=3; ... 31 6.9
UniRef50_Q4CME6 Cluster: D-alanyl-glycyl endopeptidase-like prot... 31 6.9
UniRef50_Q08C86 Cluster: Zgc:153382; n=2; Danio rerio|Rep: Zgc:1... 30 9.2
UniRef50_Q98GA9 Cluster: Transcriptional regulator; n=1; Mesorhi... 30 9.2
UniRef50_Q6KII0 Cluster: Expressed protein; n=1; Mycoplasma mobi... 30 9.2
UniRef50_Q2GE47 Cluster: Tim44-like domain protein; n=1; Neorick... 30 9.2
UniRef50_A5G8J1 Cluster: Putative transcriptional regulator; n=1... 30 9.2
UniRef50_Q1DX66 Cluster: Putative uncharacterized protein; n=1; ... 30 9.2
UniRef50_Q8PXK8 Cluster: Conserved protein; n=3; Methanosarcina|... 30 9.2
UniRef50_A7DP88 Cluster: Putative uncharacterized protein; n=1; ... 30 9.2
>UniRef50_P48588 Cluster: 40S ribosomal protein S25; n=86;
Eukaryota|Rep: 40S ribosomal protein S25 - Drosophila
melanogaster (Fruit fly)
Length = 117
Score = 145 bits (352), Expect = 2e-34
Identities = 74/110 (67%), Positives = 79/110 (71%)
Frame = +1
Query: 1 DTKASAKQPQXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNQVLFDKPTYEKLYKEVPQYK 180
D K+SAKQPQ LNNQVLFDK TYEKLYKEVP YK
Sbjct: 6 DAKSSAKQPQKTQKKKEGSGGGKAKKKKWSKGKVRDKLNNQVLFDKATYEKLYKEVPAYK 65
Query: 181 LITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYTRATKGD 330
LITP+VVSERLKIRGSLA+RAL+ELR+KGLIKQVVQHH QVIYTRATKGD
Sbjct: 66 LITPSVVSERLKIRGSLAKRALIELREKGLIKQVVQHHSQVIYTRATKGD 115
>UniRef50_P62851 Cluster: 40S ribosomal protein S25; n=42;
Euteleostomi|Rep: 40S ribosomal protein S25 - Homo
sapiens (Human)
Length = 125
Score = 113 bits (272), Expect = 8e-25
Identities = 60/78 (76%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Frame = +1
Query: 112 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQH 291
LNN VLFDK TY+KL KEVP YKLITPAVVSERLKIRGSLAR AL EL KGLIK V +H
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLVSKH 103
Query: 292 HGQVIYTRATK-GDYPVA 342
QVIYTR TK GD P A
Sbjct: 104 RAQVIYTRNTKGGDAPAA 121
>UniRef50_A3BVR1 Cluster: Putative uncharacterized protein; n=3;
Magnoliophyta|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 234
Score = 93.1 bits (221), Expect = 1e-18
Identities = 44/70 (62%), Positives = 55/70 (78%)
Frame = +1
Query: 112 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQH 291
+NN VLFD+ TY+KL EVP+YK ITP+V+SERL+I GSLARRA+ +L +GLI+ V H
Sbjct: 163 VNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMVSVH 222
Query: 292 HGQVIYTRAT 321
Q IYTRAT
Sbjct: 223 SSQQIYTRAT 232
>UniRef50_Q5KGY5 Cluster: Ribosomal protein, putative; n=7;
Dikarya|Rep: Ribosomal protein, putative - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 107
Score = 90.6 bits (215), Expect = 6e-18
Identities = 41/69 (59%), Positives = 54/69 (78%)
Frame = +1
Query: 115 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHH 294
NN V+ DK Y+++ KEVP YKLI+ +V+ +R+KI GSLARRA+ L +GLIK+VV HH
Sbjct: 37 NNAVIVDKAVYDRIIKEVPTYKLISQSVLIDRMKINGSLARRAIAFLEKEGLIKRVVHHH 96
Query: 295 GQVIYTRAT 321
Q+IYTRAT
Sbjct: 97 AQLIYTRAT 105
>UniRef50_A7AS55 Cluster: Ribosomal protein S25 , putative; n=1;
Babesia bovis|Rep: Ribosomal protein S25 , putative -
Babesia bovis
Length = 104
Score = 70.9 bits (166), Expect = 5e-12
Identities = 32/69 (46%), Positives = 49/69 (71%), Gaps = 1/69 (1%)
Frame = +1
Query: 115 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVV-QH 291
N+ V FDK TY+KL ++P+ +LIT + + ++LK+ S+AR+AL L ++ LIK V QH
Sbjct: 36 NHAVFFDKATYDKLMSDIPKARLITISTIVDKLKVNASMARKALAHLEEQKLIKPVCDQH 95
Query: 292 HGQVIYTRA 318
H Q +YT+A
Sbjct: 96 HAQRLYTKA 104
>UniRef50_Q3E792 Cluster: 40S ribosomal protein S25-A precursor;
n=24; Eukaryota|Rep: 40S ribosomal protein S25-A
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 108
Score = 69.7 bits (163), Expect = 1e-11
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +1
Query: 124 VLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQV 303
V+ D+ Y+++ KEVP Y+ ++ +V+ +RLKI GSLAR AL L +G+IK + +H Q
Sbjct: 40 VILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEKEGIIKPISKHSKQA 99
Query: 304 IYTRATKGD 330
IYTRAT +
Sbjct: 100 IYTRATASE 108
>UniRef50_Q9N9V4 Cluster: 40S ribosomal protein S25; n=8;
Trypanosomatidae|Rep: 40S ribosomal protein S25 -
Leishmania infantum
Length = 120
Score = 67.3 bits (157), Expect = 7e-11
Identities = 34/68 (50%), Positives = 46/68 (67%)
Frame = +1
Query: 112 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQH 291
L N V+FDK TY+KL EVP+YKLITP+++S+RLKI S+A L +L + LI+ V
Sbjct: 36 LQNAVMFDKETYDKLRSEVPKYKLITPSIISDRLKIAVSIAAAGLKQLCREKLIRLVSCS 95
Query: 292 HGQVIYTR 315
+YTR
Sbjct: 96 SKTRVYTR 103
>UniRef50_Q5CTY4 Cluster: 40S ribosomal protein S25; n=4;
Apicomplexa|Rep: 40S ribosomal protein S25 -
Cryptosporidium parvum Iowa II
Length = 106
Score = 66.1 bits (154), Expect = 2e-10
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +1
Query: 115 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQV-VQH 291
N+ VLFDK T ++ + +V + +L+TPAVV +LK+ S AR L + KG+IK V Q
Sbjct: 38 NHSVLFDKKTADRFHSDVLKSRLLTPAVVVNQLKVNASAARAMLRDCESKGIIKPVGEQT 97
Query: 292 HGQVIYTRA 318
HGQ+IYT+A
Sbjct: 98 HGQMIYTKA 106
>UniRef50_Q00XY1 Cluster: Ribosomal protein S25, cytosolic-tomato
sp|P46301|RS25_LYCES 40S ribosomal protein S25 p; n=1;
Ostreococcus tauri|Rep: Ribosomal protein S25,
cytosolic-tomato sp|P46301|RS25_LYCES 40S ribosomal
protein S25 p - Ostreococcus tauri
Length = 82
Score = 62.9 bits (146), Expect = 1e-09
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = +1
Query: 142 TYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYT 312
TY+KL EVP+YK+IT AV+ +RL+I SLAR+ + L+ KGLIK +V H +YT
Sbjct: 20 TYDKLLAEVPKYKMITTAVLCDRLRITCSLARKGIAILQAKGLIKPLVSHAALNVYT 76
>UniRef50_O15597 Cluster: Ribosomal protein S25; n=3; Entamoeba
histolytica|Rep: Ribosomal protein S25 - Entamoeba
histolytica
Length = 129
Score = 57.6 bits (133), Expect = 5e-08
Identities = 33/72 (45%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 112 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQV-VQ 288
LNN V+FDK T +K K+VP K+ITP VV++R+ I G+L + L L K LI V V
Sbjct: 39 LNNTVIFDKATLDKCAKDVPSMKVITPPVVADRITITGALGKILLKALDKKELIVPVKVD 98
Query: 289 HHGQVIYTRATK 324
+H +V ++R+ K
Sbjct: 99 YHIRV-FSRSDK 109
>UniRef50_UPI00001613CE Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=4; Euarchontoglires|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Homo sapiens
Length = 102
Score = 53.2 bits (122), Expect = 1e-06
Identities = 30/46 (65%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +1
Query: 208 RLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYTRATK-GDYPVA 342
RL+IRGSLAR AL EL KGLIK V +H +VIYTR TK GD A
Sbjct: 53 RLEIRGSLARAALQELLGKGLIKLVSKHRARVIYTRNTKSGDATTA 98
>UniRef50_A0C3V6 Cluster: Chromosome undetermined scaffold_148,
whole genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_148,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 204
Score = 45.2 bits (102), Expect = 3e-04
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Frame = +1
Query: 112 LNNQVLFDKPTYEKLYKEVPQY-KLITPAVVSERLKIRGSLARRALVELRDKGLIKQV-V 285
LNN V D +Y+++ ++P+ LIT + VS++ K+ GSLARR + GL+
Sbjct: 103 LNNAVFLDNTSYKQIETQLPKMGALITVSTVSDKFKVNGSLARRCIRHFAKSGLLVPAGD 162
Query: 286 QHHGQVIYT 312
Q+ Q I+T
Sbjct: 163 QNSKQYIFT 171
>UniRef50_Q8ZVP1 Cluster: 30S ribosomal protein S25e; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S25e -
Pyrobaculum aerophilum
Length = 110
Score = 37.9 bits (84), Expect = 0.046
Identities = 21/68 (30%), Positives = 39/68 (57%)
Frame = +1
Query: 121 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQ 300
QVL D+ ++ + KEV ++ITP ++ + I+ S+A + L L+++G + V + H
Sbjct: 43 QVL-DEKVFQAIAKEVQNMRVITPYEIASKYGIKMSVAFKVLRNLKERGDLVLVAKGHRT 101
Query: 301 VIYTRATK 324
IY A +
Sbjct: 102 EIYVPAKR 109
>UniRef50_Q96387 Cluster: Receptor-like protein kinase precursor;
n=1; Catharanthus roseus|Rep: Receptor-like protein
kinase precursor - Catharanthus roseus (Rosy periwinkle)
(Madagascar periwinkle)
Length = 803
Score = 33.5 bits (73), Expect = 0.98
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = -2
Query: 191 GVISLY-CGTSLYS-FSYVGLSNNTWLFNLSRTFPFD---HFFFLALPPPDPSFFFWVF 30
G S+Y GT L+S F N TWLFN+ F + HF L P P+ +FFF VF
Sbjct: 258 GPSSVYGTGTKLHSVFDPNTQINATWLFNVDSGFGYFIRFHFCNLLNPIPNNNFFFNVF 316
>UniRef50_A2BLT6 Cluster: 30S ribosomal protein S25e; n=1;
Hyperthermus butylicus DSM 5456|Rep: 30S ribosomal
protein S25e - Hyperthermus butylicus (strain DSM 5456 /
JCM 9403)
Length = 76
Score = 33.1 bits (72), Expect = 1.3
Identities = 13/44 (29%), Positives = 29/44 (65%)
Frame = +1
Query: 145 YEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIK 276
Y+++ +EV + +TP +++E+ + SLAR+ L L +G+++
Sbjct: 18 YKRIAREVKRESFVTPYMLAEKYNMTISLARQVLKRLAKEGIVE 61
>UniRef50_Q1YII8 Cluster: Possible regulatory protein; n=1;
Aurantimonas sp. SI85-9A1|Rep: Possible regulatory
protein - Aurantimonas sp. SI85-9A1
Length = 344
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/39 (41%), Positives = 26/39 (66%)
Frame = +1
Query: 166 VPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQV 282
+P +T ++++ERL I + RRAL EL +GL+K+V
Sbjct: 41 LPALGHLTESLLAERLGISRAPVRRALSELEQQGLVKRV 79
>UniRef50_A1RYY6 Cluster: Small subunit ribosomal protein S25e; n=1;
Thermofilum pendens Hrk 5|Rep: Small subunit ribosomal
protein S25e - Thermofilum pendens (strain Hrk 5)
Length = 112
Score = 32.7 bits (71), Expect = 1.7
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +1
Query: 148 EKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYTRATK 324
E + KE+ K +TP V++ + ++ S A++ L EL +G++ ++ IY K
Sbjct: 48 EHVIKEIRGLKYVTPYVLASKFSLKLSRAKKVLRELESRGVVVAYDKNSRVPIYVPVAK 106
>UniRef50_Q9Y914 Cluster: 30S ribosomal protein S25e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S25e - Aeropyrum
pernix
Length = 103
Score = 32.3 bits (70), Expect = 2.3
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +1
Query: 148 EKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIY 309
E+ KEV + + +TP +++++ ++ S+ARR L L ++G++ ++ +Y
Sbjct: 36 EQARKEVARERWVTPHKLAQKMGVKVSIARRVLRILEEEGVLVLFTRNRRSPLY 89
>UniRef50_UPI0000ECA23F Cluster: UPI0000ECA23F related cluster; n=1;
Gallus gallus|Rep: UPI0000ECA23F UniRef100 entry -
Gallus gallus
Length = 222
Score = 31.9 bits (69), Expect = 3.0
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 219 PRLPCQESTCRT*R*RFNQTSSPTPWAGDL 308
P+ PC STC T++PTPWA L
Sbjct: 31 PKHPCTPSTCEMQHPAVLSTAAPTPWASSL 60
>UniRef50_Q1D826 Cluster: Patatin-like phospholipase family protein;
n=1; Myxococcus xanthus DK 1622|Rep: Patatin-like
phospholipase family protein - Myxococcus xanthus
(strain DK 1622)
Length = 481
Score = 31.5 bits (68), Expect = 4.0
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = +1
Query: 133 DKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVV 285
D P+ L KE ++++ P E +R SLA ALV+LR++ +++ V+
Sbjct: 5 DGPSKHVLLKE--RFQITRPLEEMELRLVRASLANAALVDLREEAILRTVL 53
>UniRef50_A1RH83 Cluster: Putative uncharacterized protein; n=4;
Shewanella|Rep: Putative uncharacterized protein -
Shewanella sp. (strain W3-18-1)
Length = 61
Score = 31.5 bits (68), Expect = 4.0
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +3
Query: 183 DHTRCCL*KVEDPRLPCQESTCRT*R*RFNQTSSPT 290
++ RCC+ ++EDP L + S+C T Q SSPT
Sbjct: 24 ENRRCCMPRLEDPPLVSKRSSCLT---EDKQVSSPT 56
>UniRef50_Q3SA53 Cluster: Dicer-like 4; n=2; core eudicotyledons|Rep:
Dicer-like 4 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1702
Score = 31.5 bits (68), Expect = 4.0
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 291 VLDYLFD*TFISKFDKCSPGKGASDLQPFR-DNSGCDQLVLWYFLIQFLICGFVKQHLVV 115
VLDYL F + F K PG+ +DL+ +N + + + L +FL C + H V+
Sbjct: 1336 VLDYLMTSYFFTVFPKLKPGQ-LTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVI 1394
Query: 114 *LVTDF 97
T+F
Sbjct: 1395 EDYTNF 1400
>UniRef50_P84634 Cluster: Dicer-like protein 4; n=1; Arabidopsis
thaliana|Rep: Dicer-like protein 4 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 1589
Score = 31.5 bits (68), Expect = 4.0
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -1
Query: 291 VLDYLFD*TFISKFDKCSPGKGASDLQPFR-DNSGCDQLVLWYFLIQFLICGFVKQHLVV 115
VLDYL F + F K PG+ +DL+ +N + + + L +FL C + H V+
Sbjct: 1265 VLDYLMTSYFFTVFPKLKPGQ-LTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHEVI 1323
Query: 114 *LVTDF 97
T+F
Sbjct: 1324 EDYTNF 1329
>UniRef50_UPI0000DA42B8 Cluster: PREDICTED: similar to 40S ribosomal
protein S25; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S25 - Rattus norvegicus
Length = 93
Score = 31.1 bits (67), Expect = 5.3
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +1
Query: 250 ELRDKGLIKQVVQHHGQVIYTRATK-GDYPVA 342
EL +GL K V +H QV+ TR TK GD P A
Sbjct: 58 ELLSEGLSKLVSKHRAQVVDTRNTKGGDAPAA 89
>UniRef50_Q5TJB1 Cluster: Putative uncharacterized protein; n=3;
Rudivirus|Rep: Putative uncharacterized protein -
Sulfolobus islandicus rudivirus 1 variant XX
Length = 399
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = -2
Query: 215 FNLSETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRT-FPFDHFFFLALPPPDPSFFF 39
FN+S G++ ++ + +F+Y+ L N+ LF++ T F F L +P F+
Sbjct: 303 FNISFGLDGLLFIFWNFIIVAFAYLKLMNDKKLFSIVLTSLAIQIFLFFYLGYQNPIFYK 362
Query: 38 WVFCG 24
+V G
Sbjct: 363 FVIAG 367
>UniRef50_Q3XXC9 Cluster: Regulatory protein, GntR:Bacterial
regulatory protein, GntR; n=2; Enterococcus faecium
DO|Rep: Regulatory protein, GntR:Bacterial regulatory
protein, GntR - Enterococcus faecium DO
Length = 228
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 112 LNN--QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVV 285
+NN Q ++ + +Y E+ I+ V+ E+L I + R AL++LR++ L+K +
Sbjct: 3 INNLQQQAYESIRKQIIYSELAPGSKISDKVLEEQLAIGRTPIREALIQLRNQELVKTIP 62
Query: 286 Q 288
Q
Sbjct: 63 Q 63
>UniRef50_Q1GKZ5 Cluster: Transcriptional regulator GntR family;
n=18; Rhodobacterales|Rep: Transcriptional regulator
GntR family - Silicibacter sp. (strain TM1040)
Length = 240
Score = 31.1 bits (67), Expect = 5.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 178 KLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYTRATKGDYPV 339
KL A ++ER + RRAL ++ ++GL+ G ++ A DYPV
Sbjct: 32 KLPAEAQLAERFGVNRHTVRRALADMSEQGLVH---ARRGAGVFVAAKPTDYPV 82
>UniRef50_Q98RQ8 Cluster: 40S ribosomal protein S25; n=1; Guillardia
theta|Rep: 40S ribosomal protein S25 - Guillardia theta
(Cryptomonas phi)
Length = 87
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +1
Query: 115 NNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVEL 255
NNQ+ +K Y+K+ E+ + K ++ +S + +I+ SL ++ + L
Sbjct: 19 NNQIYIEKSLYQKIIDELNKEKFVSFTSLSSKYRIKISLIKKIINHL 65
>UniRef50_Q6MWI4 Cluster: B1159F04.16 protein; n=3; Oryza
sativa|Rep: B1159F04.16 protein - Oryza sativa (Rice)
Length = 875
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/51 (27%), Positives = 31/51 (60%)
Frame = +1
Query: 181 LITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYTRATKGDY 333
++TPA+ E+ +++ AR+ L + R+K I+ +Q + Q+++ K D+
Sbjct: 755 VLTPAIYLEQHQLKLEKARQRLADRREKKDIEATIQANRQLVHAEKIKLDH 805
>UniRef50_Q8NIW5 Cluster: Putative uncharacterized protein 94C8.080;
n=1; Neurospora crassa|Rep: Putative uncharacterized
protein 94C8.080 - Neurospora crassa
Length = 1565
Score = 31.1 bits (67), Expect = 5.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 140 GLSNNTWLFNLSRTFPFDHFFFLALPPPDPS 48
GL N+ W F + T+P FF L+ PP P+
Sbjct: 1290 GLGNDDWSFYAAETYPAATFFNLSPRPPRPA 1320
>UniRef50_A3LS16 Cluster: Predicted protein; n=2;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 540
Score = 31.1 bits (67), Expect = 5.3
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 215 FNLSETTAGVISLYCGTSLYSFSYVGLSNNTWLFNLSRTFPFDHFFFL-ALP 63
FNL+ G+ ++ G+S +F+ +G+ + W F + P D FL ALP
Sbjct: 145 FNLTFLITGIFAVVAGSSP-TFAAIGVFDAFWSFGVGGNLPVDSAIFLEALP 195
>UniRef50_P13185 Cluster: Protein kinase KIN1; n=2; Saccharomyces
cerevisiae|Rep: Protein kinase KIN1 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 1064
Score = 31.1 bits (67), Expect = 5.3
Identities = 17/61 (27%), Positives = 35/61 (57%)
Frame = +1
Query: 121 QVLFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQ 300
+V FD L++++ Q K+ P +S +++ L++ +V+ + + +KQVV+HH
Sbjct: 341 KVPFDDENSSVLHEKIKQGKVEYPQHLS--IEVISLLSKMLVVDPKRRATLKQVVEHHWM 398
Query: 301 V 303
V
Sbjct: 399 V 399
>UniRef50_A4EQ79 Cluster: Transcriptional regulatory protein; n=1;
Roseobacter sp. SK209-2-6|Rep: Transcriptional
regulatory protein - Roseobacter sp. SK209-2-6
Length = 222
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +1
Query: 178 KLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYT 312
++++ +SE L + S R AL +LRD+GL+ Q+ G ++T
Sbjct: 30 QVLSERKISEELGVSKSPVREALAQLRDEGLV-QIEPQKGARVFT 73
>UniRef50_Q5ZQV9 Cluster: Putative uncharacterized protein; n=3;
Siphoviridae|Rep: Putative uncharacterized protein -
Pseudomonas phage B3
Length = 736
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 212 NLSETTAGVISLYCGTSLYSFSYVGLSNNTWLFNL 108
+L T +S+Y GTSL SY GL+ TW + L
Sbjct: 652 SLEAGTTYTLSIYSGTSLKK-SYTGLTGTTWTYPL 685
>UniRef50_Q4CME6 Cluster: D-alanyl-glycyl endopeptidase-like
protein, putative; n=5; Trypanosoma cruzi|Rep:
D-alanyl-glycyl endopeptidase-like protein, putative -
Trypanosoma cruzi
Length = 372
Score = 30.7 bits (66), Expect = 6.9
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 160 YTVSHMWVCQTTLGCLTCHGLFLLTTS 80
Y++SH +V G +TC LFLLTTS
Sbjct: 117 YSLSHFFVALGIWGFITCMVLFLLTTS 143
>UniRef50_Q08C86 Cluster: Zgc:153382; n=2; Danio rerio|Rep:
Zgc:153382 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 396
Score = 30.3 bits (65), Expect = 9.2
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 212 NLSETTAGVISLYCGTSLYSFSYVGL 135
NLS TA + SL+CG L+ + + GL
Sbjct: 292 NLSLLTADLFSLFCGIFLFGYKFTGL 317
>UniRef50_Q98GA9 Cluster: Transcriptional regulator; n=1;
Mesorhizobium loti|Rep: Transcriptional regulator -
Rhizobium loti (Mesorhizobium loti)
Length = 260
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 127 LFDKPTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQ 279
L K +E + EV + I + ++ RL + G RR LVEL D GL+ +
Sbjct: 6 LSKKERHELILSEVRRSASIRVSRLALRLGVAGETIRRDLVELGDAGLLNR 56
>UniRef50_Q6KII0 Cluster: Expressed protein; n=1; Mycoplasma
mobile|Rep: Expressed protein - Mycoplasma mobile
Length = 395
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 191 GVISLYCGTSLYSFSYVGLSN-NTWLFNLSRTFP 93
G+IS + GT LY F + N +LFN++R FP
Sbjct: 23 GLISTFVGTILYWFYLFPTTGLNVFLFNITRPFP 56
>UniRef50_Q2GE47 Cluster: Tim44-like domain protein; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: Tim44-like
domain protein - Neorickettsia sennetsu (strain
Miyayama)
Length = 208
Score = 30.3 bits (65), Expect = 9.2
Identities = 17/31 (54%), Positives = 21/31 (67%), Gaps = 3/31 (9%)
Frame = +1
Query: 193 AVVSERL---KIRGSLARRALVELRDKGLIK 276
+VVSE++ KIRG+ R LV LR K LIK
Sbjct: 115 SVVSEKIEQRKIRGNTLERTLVALRSKNLIK 145
>UniRef50_A5G8J1 Cluster: Putative transcriptional regulator; n=1;
Geobacter uraniumreducens Rf4|Rep: Putative
transcriptional regulator - Geobacter uraniumreducens
Rf4
Length = 213
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +1
Query: 148 EKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQ 279
+K+ V ++ IT +E L ++ AR+ L +RDKG++KQ
Sbjct: 157 DKVLDYVRRHGFITRKQCAELLDLKDIPARKFLFRMRDKGILKQ 200
>UniRef50_Q1DX66 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 772
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = -2
Query: 113 NLSRTFPFDHFFFLALPPPDPSFFFWVFCGCLAEAF 6
N+S F F FFFL + P F F +FC C F
Sbjct: 249 NISYFFFFFFFFFLFVLSSRPVFLFSLFCFCFCFCF 284
>UniRef50_Q8PXK8 Cluster: Conserved protein; n=3;
Methanosarcina|Rep: Conserved protein - Methanosarcina
mazei (Methanosarcina frisia)
Length = 239
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 112 LNNQVLFDKPTYEKLYKEVPQYKLITPAVVSERLK 216
LN Q L+ K ++KLY+ P Y LIT +E LK
Sbjct: 199 LNTQ-LYIKTRHKKLYEWTPYYSLITDEASAEELK 232
>UniRef50_A7DP88 Cluster: Putative uncharacterized protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Putative
uncharacterized protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 116
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +1
Query: 139 PTYEKLYKEVPQYKLITPAVVSERLKIRGSLARRALVELRDKGLIKQVVQHHGQVIYTRA 318
P K+Y V Y +TP +SE+LKI A A +L + G + + + ++ R
Sbjct: 17 PIQTKVYLLVTCYGKMTPQTISEKLKISLDDAHTAAKDLMNLGAFIDISETEFEAMHPRF 76
Query: 319 T 321
T
Sbjct: 77 T 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,585,983
Number of Sequences: 1657284
Number of extensions: 5203853
Number of successful extensions: 16109
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 15747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16100
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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