Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N03
         (602 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_27609| Best HMM Match : No HMM Matches (HMM E-Value=.)              34   0.10 
SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32)                    31   0.54 
SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15)                   30   1.3  
SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36)                   30   1.3  
SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36)                   30   1.3  
SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36)                   30   1.3  
SB_36930| Best HMM Match : rve (HMM E-Value=0.016)                     30   1.3  
SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36)                   30   1.3  
SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32)                   30   1.3  
SB_491| Best HMM Match : rve (HMM E-Value=0.017)                       30   1.3  
SB_55617| Best HMM Match : GPW_gp25 (HMM E-Value=9.5)                  30   1.3  
SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24)                   30   1.3  
SB_35147| Best HMM Match : rve (HMM E-Value=0.019)                     30   1.3  
SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_18717| Best HMM Match : rve (HMM E-Value=0.017)                     30   1.3  
SB_13151| Best HMM Match : rve (HMM E-Value=0.017)                     30   1.3  
SB_13052| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)                    30   1.3  
SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.9  
SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.8  

>SB_27609| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 707

 Score = 33.9 bits (74), Expect = 0.10
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTL 337
           R+ SS  T  N+CQQPS  +A   S+  +   LVS  TL
Sbjct: 669 RQSSSSSTSSNICQQPSNSMAEVRSYQNDAIELVSFKTL 707


>SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32)
          Length = 517

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 18/51 (35%), Positives = 24/51 (47%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPHIYKRYS 301
           RR SSG +      +P  +L +    +   +PLV  V L QA PH   R S
Sbjct: 435 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPHYAHRAS 485


>SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15)
          Length = 615

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 532 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 576


>SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36)
          Length = 337

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 290 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 334


>SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36)
          Length = 412

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 275 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 319


>SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36)
          Length = 238

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 191 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 235


>SB_36930| Best HMM Match : rve (HMM E-Value=0.016)
          Length = 240

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 103 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 147


>SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36)
          Length = 748

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 608 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 652


>SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32)
          Length = 546

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 435 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 479


>SB_491| Best HMM Match : rve (HMM E-Value=0.017)
          Length = 240

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 103 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 147


>SB_55617| Best HMM Match : GPW_gp25 (HMM E-Value=9.5)
          Length = 173

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 86  RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 130


>SB_42776| Best HMM Match : rve (HMM E-Value=1.4e-24)
          Length = 627

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 516 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 560


>SB_35147| Best HMM Match : rve (HMM E-Value=0.019)
          Length = 214

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 103 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 147


>SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1095

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453  RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
            RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 958  RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 1002


>SB_18717| Best HMM Match : rve (HMM E-Value=0.017)
          Length = 214

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 103 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 147


>SB_13151| Best HMM Match : rve (HMM E-Value=0.017)
          Length = 240

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 103 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 147


>SB_13052| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 212

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453 RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
           RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 75  RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 119


>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
          Length = 1677

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = -3

Query: 453  RRESSGCTKDNLCQQPSGILARGISHSGNYNPLVSLVTLYQAAPH 319
            RR SSG +      +P  +L +    +   +PLV  V L QA PH
Sbjct: 1037 RRSSSGSSIPTWMSEPGPVLLKRHVRASKTDPLVDEVELLQANPH 1081


>SB_55360| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1646

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 384  FHEQVFRWVAGRGCLLYTPNFLYVDGVNTINLSAG 488
            +H   F W AG G  LY      +DGV  +NL AG
Sbjct: 1431 WHHVAFTWQAGTGLQLY------IDGVMKVNLKAG 1459


>SB_30326| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1346

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 133 WYKLCKFILYRFWSSYKIWRNPS 201
           WYK+ K +  RFW    I RN S
Sbjct: 296 WYKVSKIVNSRFWYGVGIGRNVS 318


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,775,328
Number of Sequences: 59808
Number of extensions: 474508
Number of successful extensions: 1109
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1109
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)