Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N03
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    25   0.43 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.57 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    25   0.57 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    22   5.3  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   5.3  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   5.3  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.3  

>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 25.4 bits (53), Expect = 0.43
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +3

Query: 216 YPVDLDLDGWHQRNARVAIRNDNAPS 293
           YP   D+D WH +     IR D  PS
Sbjct: 69  YP--FDVDQWHNKTFLAVIRYDGVPS 92


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 216 YPVDLDLDGWHQRNARVAIRNDNAPS 293
           YP  LD+D WH +     IR +  PS
Sbjct: 70  YP--LDVDQWHNKTFLAVIRYNGVPS 93



 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -3

Query: 339 LYQAAPHIYKRYSSHNLEH 283
           +YQ A   + R SSH L H
Sbjct: 213 IYQNADDSFHRLSSHTLNH 231


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 222 VDLDLDGWHQRNARVAIRNDNAPS 293
           V +D+D W+ +     +RND  PS
Sbjct: 66  VPIDVDRWNGKTFVTILRNDGVPS 89


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +3

Query: 438 PNFLYVDGVNTINLSAGCFYGNL 506
           PN + + G NT  ++ G F G +
Sbjct: 55  PNNISIAGQNTYKVAKGAFTGEI 77


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 184 IWRNPSIVSP 213
           IWRNPS+ +P
Sbjct: 58  IWRNPSMQTP 67


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +3

Query: 261 RVAIRNDNAPSCERSNVYICEEPLDI 338
           R+A+ NDN     + +VY+ +  +D+
Sbjct: 63  RLALMNDNVFDVSKFDVYLNDTDMDM 88


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 43  CMVSMLPYRPESTIFV 90
           C  S+LPY PE+   V
Sbjct: 340 CWNSLLPYSPENQAVV 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,969
Number of Sequences: 438
Number of extensions: 4960
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)