Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N02
         (409 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y08374-1|CAA69661.1|  383|Homo sapiens GP-39 cartilage protein p...    30   3.4  
M80927-1|AAA16074.1|  383|Homo sapiens glycoprotein protein.           30   3.4  
BT007223-1|AAP35887.1|  383|Homo sapiens chitinase 3-like 1 (car...    30   3.4  
BC017175-1|AAH17175.1|  292|Homo sapiens FAM54B protein protein.       30   3.4  
BC008568-1|AAH08568.1|  383|Homo sapiens chitinase 3-like 1 (car...    30   3.4  
AB075880-1|BAD38662.1|  292|Homo sapiens putative protein produc...    30   3.4  

>Y08374-1|CAA69661.1|  383|Homo sapiens GP-39 cartilage protein
           protein.
          Length = 383

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 9   YGFDGIDLSWQLPKRKPKK 65
           +GFDG+DL+W  P R+ K+
Sbjct: 130 HGFDGLDLAWLYPGRRDKQ 148


>M80927-1|AAA16074.1|  383|Homo sapiens glycoprotein protein.
          Length = 383

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 9   YGFDGIDLSWQLPKRKPKK 65
           +GFDG+DL+W  P R+ K+
Sbjct: 130 HGFDGLDLAWLYPGRRDKQ 148


>BT007223-1|AAP35887.1|  383|Homo sapiens chitinase 3-like 1
           (cartilage glycoprotein-39) protein.
          Length = 383

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 9   YGFDGIDLSWQLPKRKPKK 65
           +GFDG+DL+W  P R+ K+
Sbjct: 130 HGFDGLDLAWLYPGRRDKQ 148


>BC017175-1|AAH17175.1|  292|Homo sapiens FAM54B protein protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 165 ALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPER 332
           ++VR +   L +KP  +     LPN++     DVP +  L DI  I A +  T  R
Sbjct: 23  SVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVPTLADIAWIAADEEETYAR 78


>BC008568-1|AAH08568.1|  383|Homo sapiens chitinase 3-like 1
           (cartilage glycoprotein-39) protein.
          Length = 383

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +3

Query: 9   YGFDGIDLSWQLPKRKPKK 65
           +GFDG+DL+W  P R+ K+
Sbjct: 130 HGFDGLDLAWLYPGRRDKQ 148


>AB075880-1|BAD38662.1|  292|Homo sapiens putative protein product
           of HYST1888 protein.
          Length = 292

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 18/56 (32%), Positives = 27/56 (48%)
 Frame = +3

Query: 165 ALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPER 332
           ++VR +   L +KP  +     LPN++     DVP +  L DI  I A +  T  R
Sbjct: 23  SVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVPTLADIAWIAADEEETYAR 78


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,935,216
Number of Sequences: 237096
Number of extensions: 1143544
Number of successful extensions: 5954
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5954
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)