Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_N01
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   0.95 
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   6.7  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   8.9  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   8.9  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = -2

Query: 196 VSPIFKGGLKNAPEYQVLLKMMKVQNYLENLLKK 95
           +SPIF  G      Y ++   + ++ YL+ L++K
Sbjct: 135 LSPIFTSGKLKEMFYLIIECSLNLETYLDKLIEK 168


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 509 LAEKYGTDDQFYPKDLKRRALV 444
           LAE+ GTD+ +  K LK+  ++
Sbjct: 2   LAERKGTDELYAIKILKKDIII 23


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -3

Query: 333 PKCYPRVFGFILKRKQM 283
           P C P++F F L   Q+
Sbjct: 153 PMCSPKLFAFDLNTSQL 169


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +2

Query: 530 FPIKQIHRLPLK 565
           FP K  H+LPLK
Sbjct: 134 FPSKMDHQLPLK 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,870
Number of Sequences: 438
Number of extensions: 3364
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)