Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_N01
(581 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g47730.1 68415.m05960 glutathione S-transferase 6 (GST6) iden... 57 7e-09
At5g17220.1 68418.m02018 glutathione S-transferase, putative 50 1e-06
At3g03190.1 68416.m00315 glutathione S-transferase, putative ide... 49 2e-06
At1g49860.1 68414.m05590 glutathione S-transferase, putative sim... 48 3e-06
At3g62760.1 68416.m07050 glutathione S-transferase, putative Glu... 48 5e-06
At2g30870.1 68415.m03762 glutathione S-transferase, putative sup... 43 1e-04
At2g30860.1 68415.m03761 glutathione S-transferase, putative ide... 43 2e-04
At1g02930.1 68414.m00260 glutathione S-transferase, putative sim... 37 0.011
At4g02520.1 68417.m00345 glutathione S-transferase, putative 36 0.026
At1g02920.1 68414.m00259 glutathione S-transferase, putative sim... 35 0.034
At5g44000.1 68418.m05384 glutathione S-transferase C-terminal do... 30 1.3
At5g19510.1 68418.m02324 elongation factor 1B alpha-subunit 2 (e... 29 2.3
At5g12110.1 68418.m01422 elongation factor 1B alpha-subunit 1 (e... 29 2.3
At2g29480.1 68415.m03581 glutathione S-transferase, putative sim... 29 2.3
At1g65220.1 68414.m07394 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 28 4.0
At1g61970.1 68414.m06990 mitochondrial transcription termination... 28 5.2
At5g36230.1 68418.m04371 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 27 6.9
At1g63400.1 68414.m07170 pentatricopeptide (PPR) repeat-containi... 27 6.9
At1g56250.1 68414.m06466 SKP1 interacting partner 3-related cont... 27 6.9
At5g15700.1 68418.m01836 DNA-directed RNA polymerase (RPOT2) ide... 27 9.1
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 27 9.1
At1g62010.1 68414.m06994 mitochondrial transcription termination... 27 9.1
>At2g47730.1 68415.m05960 glutathione S-transferase 6 (GST6)
identical to GB:X95295. Based on identical cDNA hits,
the translation is now 40 AAs longer at the N-terminal,
and start of exon2 is also corrected.
Length = 263
Score = 57.2 bits (132), Expect = 7e-09
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 10/155 (6%)
Frame = -1
Query: 572 VPTLKEDDGFVLWESRAIACYLAEKYG-TDDQFYPKDLKR-RALVNQRLYFDSSALYVKI 399
+P L ED L+ESRAI YLAE+Y ++ +D K+ +A N L +
Sbjct: 103 IPAL-EDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNA 161
Query: 398 RAICFPIIFLG------ETEIKEPLRDDLNVTLGFLDLFLKESKWVAGDSLTIADTSIYA 237
+ F +F G + + L L L + L +S+++AGDS T+AD
Sbjct: 162 SKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLP 221
Query: 236 SVSTILAVGWDI--DSFPNIQRWIKECSGIPGAAE 138
++ +L + DS P + WIK+ S P A+
Sbjct: 222 AIHYLLGTDSKVLFDSRPKVSEWIKKISARPAWAK 256
>At5g17220.1 68418.m02018 glutathione S-transferase, putative
Length = 214
Score = 50.0 bits (114), Expect = 1e-06
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 14/155 (9%)
Frame = -1
Query: 572 VPTLKEDDGFVLWESRAIACYLAEKYGTD-DQFYPKDLKRRALVNQ-----RLYFDSSAL 411
VP + ED F L+ESRAIA Y A K+ K L+ RA+V+Q YF+ A
Sbjct: 54 VPAI-EDGDFKLFESRAIARYYATKFADQGTNLLGKSLEHRAIVDQWADVETYYFNVLAQ 112
Query: 410 YVKIRAICFPIIFLGETEIKEPLRDDLNVTLG-FLDLF---LKESKWVAGDSLTIADTSI 243
+ I I P LGE + L +DL V LG LD++ L ++++AG+ T+AD +
Sbjct: 113 PLVINLIIKP--RLGE-KCDVVLVEDLKVKLGVVLDIYNNRLSSNRFLAGEEFTMADLTH 169
Query: 242 YASVSTILAVGWDIDSF----PNIQRWIKECSGIP 150
++ ++++ DI+ + RW +E S P
Sbjct: 170 MPAMGYLMSI-TDINQMVKARGSFNRWWEEISDRP 203
>At3g03190.1 68416.m00315 glutathione S-transferase, putative
identical to glutathione S-transferase GB:AAB09584 from
[Arabidopsis thaliana]
Length = 214
Score = 49.2 bits (112), Expect = 2e-06
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Frame = -1
Query: 554 DDGFV-LWESRAIACYLAEKY---GTDDQFYPKDLKRRALVNQRLYFDSSALYVKIRAIC 387
+DG++ L+ESRAIA Y A KY GTD K L+ RA+V+Q + +++ Y +
Sbjct: 58 EDGYLKLFESRAIARYYATKYADQGTD--LLGKTLEGRAIVDQWVEVENNYFYAVALPLV 115
Query: 386 FPIIFLG------ETEIKEPLRDDLNVTLGFLDLFLKESKWVAGDSLTIADTSIYASVST 225
++F + + E L+ + L + L ++++ GD T+AD S +
Sbjct: 116 MNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRY 175
Query: 224 IL---AVGWDIDSFPNIQRWIKECSGIP 150
I+ ++ + S N+ RW E S P
Sbjct: 176 IMNETSLSGLVTSRENLNRWWNEISARP 203
>At1g49860.1 68414.m05590 glutathione S-transferase, putative
similar to GI:860955 from [Hyoscyamus muticus] (Plant
Physiol. 109 (1), 253-260 (1995))
Length = 254
Score = 48.4 bits (110), Expect = 3e-06
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Frame = -1
Query: 572 VPTLKEDDGFVLWESRAIACYLAEKY-GTDDQFYPKDLKRRALVNQRLYFDS-------S 417
VP L ED L+E +AI YLAE+Y P D K+RA+++ + DS S
Sbjct: 57 VPVL-EDGDLKLFEPKAITRYLAEQYKDVGTNLLPDDPKKRAIMSMWMEVDSNQFLPIAS 115
Query: 416 ALYVKIRAICFPIIFLGETEIKEPLRDDLNVTLGFLDLFLKESKWVAGDSLTIADTSIYA 237
L ++ + + +T ++E ++ L+ L + L ES ++AG+S ++AD A
Sbjct: 116 TLIKELIINPYQGLATDDTAVQEN-KEKLSEVLNIYETRLGESPYLAGESFSLADLHHLA 174
Query: 236 SVSTILAVGWD-----IDSFPNIQRWIKE 165
+ +L + I S PN+ W+++
Sbjct: 175 PIDYLLNTDEEELKNLIYSRPNVAAWVEK 203
>At3g62760.1 68416.m07050 glutathione S-transferase, putative
Glutathione transferase III(b) - Zea mays, EMBL:AJ010296
Length = 219
Score = 48.0 bits (109), Expect = 5e-06
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 14/152 (9%)
Frame = -1
Query: 572 VPTLKEDDGFVLWESRAIACYLAEKY---GTDDQFYPKDLKRRALVNQRLYFDSSALYVK 402
VP L++DD L+ESRAI Y+AEK+ GTD + +D K A+V ++
Sbjct: 54 VPALQDDD-LTLFESRAITAYIAEKHRDKGTDLTRH-EDPKEAAIVKLWSEVEAHHFNPA 111
Query: 401 IRAICFPIIFL---GETEIKEPLRDDLNVTLGFLDLF---LKESKWVAGDSLTIADTS-- 246
I A+ +I + GE+ + ++L LD++ L ++K++AGD+ T+AD
Sbjct: 112 ISAVIHQLIVVPLQGESPNAAIVEENLENLGKILDVYEERLGKTKYLAGDTYTLADLHHV 171
Query: 245 --IYASVSTILAVGWDIDSFPNIQRWIKE-CS 159
Y + TI A G I+ PN++ W ++ CS
Sbjct: 172 PYTYYFMKTIHA-GL-INDRPNVKAWWEDLCS 201
>At2g30870.1 68415.m03762 glutathione S-transferase, putative
supported by cDNA GI:443698 GB:D17673
Length = 215
Score = 43.2 bits (97), Expect = 1e-04
Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 8/115 (6%)
Frame = -1
Query: 572 VPTLKEDDGFVLWESRAIACYLAEKYGTD-DQFYPKDLKRRALVNQRLYFDSSALYVKIR 396
+P L + D + ++ESRAI Y+AEKY + K ++ R V Q L ++++ + +
Sbjct: 53 IPVLVDGD-YKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLL 111
Query: 395 AICFPIIF---LG----ETEIKEPLRDDLNVTLGFLDLFLKESKWVAGDSLTIAD 252
A+ I+F +G E IKE + L L + L +++++AGD +++AD
Sbjct: 112 ALTLNIVFAPLMGFPADEKVIKES-EEKLAEVLDVYEAQLSKNEYLAGDFVSLAD 165
>At2g30860.1 68415.m03761 glutathione S-transferase, putative
identical to GB:Y12295
Length = 215
Score = 42.7 bits (96), Expect = 2e-04
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 7/114 (6%)
Frame = -1
Query: 572 VPTLKEDDGFVLWESRAIACYLAEKYGTD-DQFYPKDLKRRALVNQRLYFDSSALYVKIR 396
VP + + D + ++ESRA+ Y+AEKY + K ++ R V Q L +++ + +
Sbjct: 53 VPAVVDGD-YKIFESRAVMRYVAEKYRSQGPDLLGKTVEDRGQVEQWLDVEATTYHPPLL 111
Query: 395 AICFPIIF---LGETEIKEPLRDDLNVTLGFLDLF---LKESKWVAGDSLTIAD 252
+ I+F +G ++ +++ G LD++ L +SK++AGD +++AD
Sbjct: 112 NLTLHIMFASVMGFPSDEKLIKESEEKLAGVLDVYEAHLSKSKYLAGDFVSLAD 165
>At1g02930.1 68414.m00260 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]
Length = 208
Score = 36.7 bits (81), Expect = 0.011
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 8/146 (5%)
Frame = -1
Query: 557 EDDGFVLWESRAIACYLAEKYGTDDQFYPKDLKRRALVNQRLYFDSSAL-YVKIRAICFP 381
ED F ++ESRAI Y+A ++ K A++ + +S V + +
Sbjct: 59 EDGDFKIFESRAITQYIAHEFSDKGNNLLSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQ 118
Query: 380 II--FLGETEIKEPLRDDLNVTLGFLDLF---LKESKWVAGDSLTIADTSIYASVSTILA 216
++ G T K + ++ LD++ L ESK++A D T+ D + +L
Sbjct: 119 VLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYLLG 178
Query: 215 VGWD--IDSFPNIQRWIKECSGIPGA 144
D P++ W+ + + P A
Sbjct: 179 TPTKKLFDERPHVSAWVADITSRPSA 204
>At4g02520.1 68417.m00345 glutathione S-transferase, putative
Length = 212
Score = 35.5 bits (78), Expect = 0.026
Identities = 36/150 (24%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Frame = -1
Query: 557 EDDGFVLWESRAIACYLAEKY---GTD-DQFYPKDLKRRALVNQRLYFDSSALYVKIRAI 390
ED L+ESRAI Y+A +Y GT+ Q K++ + A++ + + +
Sbjct: 59 EDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKL 118
Query: 389 CFPIIF---LGETEIKEPLRDDLNVTLGFLDLF---LKESKWVAGDSLTIADTSIYASVS 228
F IF G T + + ++ LD++ LKE K++AG++ T+ D ++
Sbjct: 119 AFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQ 178
Query: 227 TILAVGWD--IDSFPNIQRWIKECSGIPGA 144
+L P + W+ E + P +
Sbjct: 179 YLLGTPTKKLFTERPRVNEWVAEITKRPAS 208
>At1g02920.1 68414.m00259 glutathione S-transferase, putative
similar to glutathione S-transferase GI:860955 from
[Hyoscyamus muticus]; supported by cDNA GI:443697.
Length = 209
Score = 35.1 bits (77), Expect = 0.034
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 9/147 (6%)
Frame = -1
Query: 557 EDDGFVLWESRAIACYLAEKYG-TDDQFYPKDLKRRALVNQRLYFDSSAL-YVKIRAICF 384
ED F L+ESRAI Y+A Y +Q K A + + +S V + +
Sbjct: 59 EDGDFKLFESRAITQYIAHFYSDKGNQLVSLGSKDIAGIAMGIEIESHEFDPVGSKLVWE 118
Query: 383 PII--FLGETEIKEPLRDDLNVTLGFLDLF---LKESKWVAGDSLTIADTSIYASVSTIL 219
++ G T K + ++ LD++ L ESK++A D T+ D + +L
Sbjct: 119 QVLKPLYGMTTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDKFTLVDLHTIPVIQYLL 178
Query: 218 AVGWD--IDSFPNIQRWIKECSGIPGA 144
D P++ W+ + + P A
Sbjct: 179 GTPTKKLFDERPHVSAWVADITSRPSA 205
>At5g44000.1 68418.m05384 glutathione S-transferase C-terminal
domain-containing protein contains Pfam domain PF00043:
Glutathione S-transferase, C-terminal domain
Length = 399
Score = 29.9 bits (64), Expect = 1.3
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Frame = -1
Query: 413 LYVKIRAICFPIIFLGETEIKEPLRDDLNVTLGFLDLFLKESKWVAGDSLTIADTSIYA- 237
+Y K+ + F E + ++L TL ++ L ++++ G+ LT+AD ++
Sbjct: 245 VYPKVNNGVYRCGFAQSQEAYDGAVNELFSTLDEIEDHLGSNRYLCGERLTLADVCLFTT 304
Query: 236 -----SVSTIL--AVGWDIDSFPNIQRWIKECSGIPGAA 141
SV IL + +PN+ +++E IPG A
Sbjct: 305 LIRFDSVYNILFKCTKKKLVEYPNLYGYLREIYQIPGVA 343
>At5g19510.1 68418.m02324 elongation factor 1B alpha-subunit 2
(eEF1Balpha2) identical to elongation factor 1B
alpha-subunit [Arabidopsis thaliana] GI:6686821
Length = 224
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 284 WVAGDSLTIADTSIYASVSTILAVGWDIDSFPNIQRW 174
+++GD L++ D +YA+V + D+FPN +W
Sbjct: 26 YISGDQLSVDDVKVYAAVPVKPS-----DAFPNASKW 57
>At5g12110.1 68418.m01422 elongation factor 1B alpha-subunit 1
(eEF1Balpha1) identical to elongation factor 1B
alpha-subunit [Arabidopsis thaliana] GI:6686819
Length = 228
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -1
Query: 335 DLNVTLGF--LDLFLKESKWVAGDSLTIADTSIYASVSTILAVGWDIDSFPNIQRW 174
DL+ G L+ L +++GD L++ D +YA+V + G D FPN +W
Sbjct: 7 DLHTERGLKTLEEHLAGKTYISGDQLSVDDVKVYAAV--LENPG---DGFPNASKW 57
>At2g29480.1 68415.m03581 glutathione S-transferase, putative
similar to Glutathione S-Transferase [Arabidopsis
thaliana] gi:940381|16226389|gb|AF428387.
Length = 225
Score = 29.1 bits (62), Expect = 2.3
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 8/170 (4%)
Frame = -1
Query: 572 VPTLKEDDGFVLWESRAIACYLAEKYGTDDQFYPKDLKRRALVNQRLYFDSSALYVKIRA 393
VP L +D +L ES I Y+ + + ++ P D +A+V F + + +I
Sbjct: 57 VPVLVHNDK-LLSESHVILEYIDQTWN-NNPILPHDPYEKAMVR----FWAKFVDEQILP 110
Query: 392 ICFPIIFLGETEIKEPLRDDLNVTLGFLDLFLKESKWVAGDSLTIADTSIYASVSTILAV 213
+ F + E I + +++ L FL+ + + G ++ D + + LA
Sbjct: 111 VGFMPLVKAEKGIDVAI-EEIREMLMFLEKEVTGKDFFGGKTIGFLDMVAGSMIPFCLAR 169
Query: 212 GWDI--------DSFPNIQRWIKECSGIPGAAENDEGAKLFGELVKKNLE 87
W+ D+FP + RWIK + + E + E +KK +E
Sbjct: 170 AWECLGIDMTPEDTFPELNRWIKNLNEVEIVRECIPPKEKHIERMKKIIE 219
>At1g65220.1 68414.m07394 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein low similarity to SP|P47823
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Oryctolagus
cuniculus}; contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 411
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -2
Query: 505 RKSMVQTINFIQKI*NVALLLIKDYISIVRHYM*KLELF 389
R++++ ++ +IQKI LIK+ ++ R ++ LELF
Sbjct: 100 REAILPSVVYIQKILRRKAFLIKNLENVTRRFLQSLELF 138
>At1g61970.1 68414.m06990 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 418
Score = 27.9 bits (59), Expect = 5.2
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = -1
Query: 371 LGETEIKEPLRDDLNVTLGFL--DLFLKESKWVAGDSLTIADTSIYASVSTILAVGWDID 198
+ E I+E + L +LGF D++ KW SL +++ + S+ T L +G+ D
Sbjct: 252 MNEKTIEEKVH--LYKSLGFDVGDVWSSFKKWPI--SLRVSEKKMLDSIETFLGLGFSRD 307
Query: 197 SFPNIQRWIKECSGI 153
F + + C G+
Sbjct: 308 EFAKMVKHFPPCIGL 322
>At5g36230.1 68418.m04371 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein low similarity to SP|Q13144
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Homo sapiens};
contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 411
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/39 (33%), Positives = 25/39 (64%)
Frame = -2
Query: 505 RKSMVQTINFIQKI*NVALLLIKDYISIVRHYM*KLELF 389
R++++ ++ +IQKI LIK+ ++ R ++ LELF
Sbjct: 100 REAILPSVVYIQKILRRKPFLIKNLENVTRRFLQSLELF 138
>At1g63400.1 68414.m07170 pentatricopeptide (PPR) repeat-containing
protein contains multiple PPR-repeats Pfam profile:
PF01535
Length = 577
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 200 DSFPNIQRWIKECSGIPGAAENDEGAKLFGELVKKNL 90
D FPN+ + +G A DEG +LF E+ ++ L
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
>At1g56250.1 68414.m06466 SKP1 interacting partner 3-related
contains similarity to SKP1 interacting partner 3
GI:10716951 from [Arabidopsis thaliana]
Length = 282
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = -1
Query: 566 TLKEDDGFVLWESRAIACYLAEKYGTDDQFYPKDLKRRALVNQRLYFDSSALYVKIRAIC 387
++K +G + + + C +K FY +R A+ + + D K R
Sbjct: 177 SIKSKNGQISKSATYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKCRDDG 236
Query: 386 FPIIFLGETEIKEPLRDDLNVTL 318
+ I LGE E +E D++N+TL
Sbjct: 237 WMEIELGEFETREGEDDEVNMTL 259
>At5g15700.1 68418.m01836 DNA-directed RNA polymerase (RPOT2)
identical to phage-type RNA polymerase rpoT2
[Arabidopsis thaliana] GI:11340683
Length = 1011
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 275 GDSLTIADTSIYASVSTILAVGWDIDSFPNIQRWIKECSGIPGAAEND 132
GD + + YA+ T+ A+ + I RW EC+ I A+EN+
Sbjct: 817 GDEKEVFGAACYAAKVTLAAIDEMFQAARAIMRWFGECAKII-ASENE 863
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 188 NIQRWIKECSGIPGAAENDEGAKL 117
N+QRWI E G+PG +E +L
Sbjct: 42 NLQRWIIEVHGVPGTLYANETYQL 65
>At1g62010.1 68414.m06994 mitochondrial transcription termination
factor-related / mTERF-related contains Pfam profile
PF02536: mTERF
Length = 415
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/72 (25%), Positives = 33/72 (45%)
Frame = -1
Query: 371 LGETEIKEPLRDDLNVTLGFLDLFLKESKWVAGDSLTIADTSIYASVSTILAVGWDIDSF 192
+ + I+E +R +V D++ KW SLT ++ + S+ T L +G+ D F
Sbjct: 236 MSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPR--SLTHSEKKVANSIETFLGLGFSRDVF 293
Query: 191 PNIQRWIKECSG 156
+ + C G
Sbjct: 294 MMMFKRFPPCIG 305
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,524,252
Number of Sequences: 28952
Number of extensions: 242166
Number of successful extensions: 636
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1141585696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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