Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M21
         (551 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    22   3.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   4.1  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   5.4  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   7.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   9.5  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 108 NNGQLCAGGEAGKDSCKGDSGG 173
           NN     G   G+D  +GD GG
Sbjct: 87  NNDDSGGGRGGGRDGDRGDGGG 108


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 270 YIRRGCLLSRIYPFQ 226
           Y+R GCL +R++ +Q
Sbjct: 268 YLRFGCLSTRLFYYQ 282


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = +3

Query: 36  VPYFGRENCQAAQRTLREGAKVVINNGQLCAGGEAGKDSCK 158
           +PYF      A+  + +  +   + NG+L  GG    D+ K
Sbjct: 286 LPYFAAAVAAASNLSPKTNSSPDLWNGKLKHGGPTPSDATK 326


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 178 RGPPESPLHESLPA 137
           RGPP +PL   L A
Sbjct: 58  RGPPRTPLQPKLVA 71


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -3

Query: 498 HNRLKFMVGYRESSTYRIYTTYVK 427
           +N   F VGY ++ T     +YVK
Sbjct: 380 NNNGGFWVGYEDTDTAGYKASYVK 403


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 347 FQCPTSSCILGFYCTSYPWNI 285
           F+C     I  FYC S  +N+
Sbjct: 48  FKCYNLRRIYYFYCVSITFNV 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,164
Number of Sequences: 336
Number of extensions: 3066
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)