Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M21
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    44   1e-06
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          27   0.13 
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   4.8  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   6.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   6.3  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   8.3  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 43.6 bits (98), Expect = 1e-06
 Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
 Frame = +3

Query: 120 LCAGGEAGKDSCKGDSGGPLMYEVGNT--FEAIGVVSFGTDKCGSVNIPGVYTNIYEYIP 293
           +CA  + GKD+C+ DSGGP++++   T     IG++S+G + CG    P   T +  YI 
Sbjct: 335 MCAYAK-GKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAE-CG--KYPNGNTKVGSYID 390

Query: 294 WIRS 305
           WI S
Sbjct: 391 WIVS 394


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = -2

Query: 442 YDIRKVLRHKYLIAQYALCKL 380
           Y+I+K+LR+K LI+Q A+ +L
Sbjct: 474 YEIKKLLRYKLLISQNAVSEL 494


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -3

Query: 270 YIRRGCLLSRIYPFQ 226
           Y+R GCL +R++ +Q
Sbjct: 272 YLRFGCLSTRLFYYQ 286


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = -3

Query: 102 QPLHLHAMSSALLDSSLYQSMEL*RVVSLY 13
           QP+H+H  ++    +  Y+  ++ + V +Y
Sbjct: 274 QPVHVHKQTAIAFRTPTYRMQQVEQPVQVY 303


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = -3

Query: 102 QPLHLHAMSSALLDSSLYQSMEL*RVVSLY 13
           QP+H+H  ++    +  Y+  ++ + V +Y
Sbjct: 274 QPVHVHKQTAIAFRTPTYRMQQVEQPVQVY 303


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -1

Query: 167 GVTFARVLASFTSRAQLPVIYNNLCTFTQCPLRCLTVLSTKVWN 36
           G  FAR+L+  T    L    + +C   +   + L V   ++W+
Sbjct: 521 GTVFARLLSVLTELRTLGNQNSEMCFSLKFKNKKLPVFLAEIWD 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,648
Number of Sequences: 438
Number of extensions: 3203
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)