Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_M20
(540 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09) 53 2e-07
SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13) 44 1e-04
SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_20446| Best HMM Match : HLH (HMM E-Value=1.26117e-44) 39 0.002
SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15) 35 0.037
SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14) 35 0.049
SB_15721| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.065
SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21) 34 0.085
SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_38739| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.60
SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_43750| Best HMM Match : NAP (HMM E-Value=3.3) 30 1.1
SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09) 30 1.4
SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_7044| Best HMM Match : PAN (HMM E-Value=1.3e-07) 30 1.4
SB_7690| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018) 29 1.8
SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0) 29 1.8
SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05) 29 2.4
SB_41073| Best HMM Match : GRP (HMM E-Value=2.8) 29 2.4
SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5) 29 2.4
SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1) 29 3.2
SB_36889| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.6
SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 28 5.6
SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07) 28 5.6
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 28 5.6
SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49) 28 5.6
SB_53398| Best HMM Match : RVT_1 (HMM E-Value=7.8e-12) 27 7.4
SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.4
SB_35674| Best HMM Match : SH2 (HMM E-Value=0) 27 7.4
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 27 7.4
SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.8
SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62) 27 9.8
SB_36160| Best HMM Match : TFIIF_alpha (HMM E-Value=0) 27 9.8
SB_13005| Best HMM Match : PSI (HMM E-Value=2.9e-11) 27 9.8
>SB_10010| Best HMM Match : HLH (HMM E-Value=8.5e-09)
Length = 227
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/61 (47%), Positives = 37/61 (60%)
Frame = +3
Query: 300 FKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYIQYL 479
+KE RR +H AEQKRR IK G+D L +VPT +S K SKA VLQK+ + +
Sbjct: 16 YKEHRRMSHISAEQKRRCNIKMGFDQLASMVPTLASQKSS--KVSKATVLQKNDNMVHLC 73
Query: 480 L 482
L
Sbjct: 74 L 74
>SB_30776| Best HMM Match : HLH (HMM E-Value=1.7e-13)
Length = 1217
Score = 43.6 bits (98), Expect = 1e-04
Identities = 27/80 (33%), Positives = 42/80 (52%)
Frame = +3
Query: 234 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTD 413
S +N T S + ++ + RRR H + E++R+D I L E+VP C
Sbjct: 112 SPTNNKTPYYISSDIVLSGGIAQQTRRRIVHNEVERRRKDKINNWITKLAEVVPDC---- 167
Query: 414 ASGYKHSKAAVLQKSIDYIQ 473
A G K SK VL+KS++Y++
Sbjct: 168 ARG-KQSKNIVLEKSVEYLK 186
>SB_40771| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 41.5 bits (93), Expect = 4e-04
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 228 TPSSSNQNTEDEDDSGDNKASAL-SFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQ 404
TP S+ + + + + ++ S S R+EAH + E+KRR+ I + + L+ ++P+C
Sbjct: 452 TPRSTKRKRDSINSAVNHSTSKTPSTPAERKEAHLEKERKRRERIARSWFLLRSMIPSCS 511
Query: 405 QTDASGYKHSKAAVLQKSIDYIQY 476
T KA V + ++ YI +
Sbjct: 512 DT------ADKATVFEMTVAYIHH 529
>SB_20446| Best HMM Match : HLH (HMM E-Value=1.26117e-44)
Length = 424
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 303 KERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYI 470
K RRE E++R +I G+ +L+ L+P + G K SKAA+LQ++ +YI
Sbjct: 41 KRLRREIANSNERRRMQSINSGFQALRMLIP-----NTEGEKLSKAAILQQTSEYI 91
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 303 KERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYI 470
K RRE E++R +I G+ +L+ L+P + G K SKAA+LQ++ +YI
Sbjct: 208 KRLRREIANSNERRRMQSINSGFQALRMLIP-----NTEGEKLSKAAILQQTSEYI 258
>SB_9980| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 35.5 bits (78), Expect = 0.028
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +3
Query: 288 SALSFKERRREAHTQAEQKRRDAIK 362
S+ S K+ RR AH+ AEQKRRDAIK
Sbjct: 34 SSSSSKQNRRFAHSVAEQKRRDAIK 58
>SB_59476| Best HMM Match : HLH (HMM E-Value=1.2e-15)
Length = 272
Score = 35.1 bits (77), Expect = 0.037
Identities = 18/56 (32%), Positives = 32/56 (57%)
Frame = +3
Query: 312 RREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYIQYL 479
R+ E+KRRD I + L+ LVPT + + S K KA +L +++++++L
Sbjct: 12 RKRRRGLIEKKRRDRINRCLVELRRLVPTALEKEGSS-KLEKAEILHLTVEHLKWL 66
>SB_25662| Best HMM Match : HLH (HMM E-Value=2.3e-14)
Length = 468
Score = 34.7 bits (76), Expect = 0.049
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +3
Query: 309 RRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYIQ 473
RRR ++E++RRD + L +VP C +S K K VLQ +++Y++
Sbjct: 137 RRRTTRNESEKRRRDKLNVYITELAAMVPMCA---SSRKKLDKTTVLQMAVNYMK 188
>SB_15721| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 34.3 bits (75), Expect = 0.065
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = +3
Query: 267 DSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAV 446
DSGD+K K ++ H++ E++RRD + + L ++P C +A K K V
Sbjct: 172 DSGDSKGFQ---KGAIKQNHSEIEKRRRDKMNTYINELSTMIPMC---NAMSRKLDKLTV 225
Query: 447 LQKSIDYIQYL 479
L+ ++ +++ L
Sbjct: 226 LRMAVQHMRAL 236
>SB_56922| Best HMM Match : HLH (HMM E-Value=1.9e-21)
Length = 157
Score = 33.9 bits (74), Expect = 0.085
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 237 SSNQNTEDEDDSGDNK---ASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQ 407
S +Q+T+D +D G + L+ ++R + E+KR + ++ L+ +P
Sbjct: 4 SESQSTDDIEDQGATSELDSPELADTPKKRYTANRKERKRTQTMNTAFEDLRNHIPNVPP 63
Query: 408 TDASGYKHSKAAVLQKSIDYIQYLL 482
K SK L+ +I YI+YL+
Sbjct: 64 DT----KLSKIKTLRLAISYIRYLM 84
>SB_25442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1010
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +3
Query: 315 REAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYIQYL 479
RE H++ E++RR+ + + L ++VP+C K K VL+ +++Y++ L
Sbjct: 14 RENHSEIERRRRNKMNAYINELSDMVPSC---TGLARKPDKLTVLRMAVNYMKTL 65
>SB_38739| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 31.5 bits (68), Expect = 0.46
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3
Query: 267 DSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKH-SKAA 443
DS D + LS +RR+ E+ RR I + L+ LV DAS Y KA
Sbjct: 7 DSSDYVSKILS--DRRKAKKPMMEKLRRARINDSLNELKVLVLELLNKDASRYSKMEKAD 64
Query: 444 VLQKSIDYIQ 473
+L+ ++ Y++
Sbjct: 65 ILEMTVGYLR 74
>SB_27282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 644
Score = 31.5 bits (68), Expect = 0.46
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +3
Query: 228 TPSSS-NQNTEDEDDSGDNKASA 293
TPSSS N +T+D+DD DNK +A
Sbjct: 494 TPSSSDNDDTQDDDDKSDNKPNA 516
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +3
Query: 162 ITDICN--MYSRCGSSGSIQNIHQTPSSS-NQNTEDEDDSGDNKASA 293
I DIC+ R IQ PSSS N +T+D+DD D + SA
Sbjct: 371 ILDICSEVFLIRNTREKGIQPSSDGPSSSDNDDTQDDDDKSDFQPSA 417
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/23 (52%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Frame = +3
Query: 228 TPSSSN-QNTEDEDDSGDNKASA 293
TPSSS+ +T+D+D+ DNK +A
Sbjct: 560 TPSSSDGDDTQDDDEKSDNKPNA 582
>SB_23535| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 31.1 bits (67), Expect = 0.60
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +3
Query: 225 QTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQ 404
Q + + TE E+D D K S ++RRRE I + + L+ LV Q
Sbjct: 3 QDSAKDEKMTEAENDIDDRKWSKPVMEKRRRE-----------RINRSLEELKRLVLEAQ 51
Query: 405 QTDASGY-KHSKAAVLQKSIDYIQYL 479
D S Y K KA +L+ ++ +++ L
Sbjct: 52 HRDCSRYTKLEKADILEMTVKHLRTL 77
>SB_5702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 31.1 bits (67), Expect = 0.60
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 195 GSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 341
G S SI +Q P Q+ +D +D D+ A+ SF+ +AH A Q
Sbjct: 2 GHSASIAKKYQAPK---QHVDDTNDEVDSLATVSSFRPTSPDAHNDARQ 47
>SB_49233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 30.7 bits (66), Expect = 0.80
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 201 SGSIQNIHQTPSSSNQNTEDEDDSGDNKA 287
SG+++ QTPS +N NT DSG A
Sbjct: 4 SGALKEEQQTPSDTNNNTNGSSDSGGGGA 32
>SB_43750| Best HMM Match : NAP (HMM E-Value=3.3)
Length = 514
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 192 CGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKK 365
CGSSG + + P+ + E+ + S + + +R+RE Q EQ+R+ A++K
Sbjct: 437 CGSSGRKKRQAEMPAPVSTVQEETERSINMCPPGIWVCDRKRELKRQREQRRQAAMEK 494
>SB_44231| Best HMM Match : Ion_trans_2 (HMM E-Value=6.5e-09)
Length = 441
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 201 SGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDA 356
S +++ HQ +S+ + + D A+ K+RR E QA +KR +A
Sbjct: 357 SSVVEDFHQNLTSTIERLRERHDQDMRNYIAILKKQRRNENKYQAYEKREEA 408
>SB_22651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 950
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +3
Query: 222 HQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTC 401
++ P + ED+DD + S K R+ + E K+ KK + +E
Sbjct: 723 NKVPKVDKDDEEDDDDEEEESEEDESNKPSSRQVTAKKEDKKGKKKKKEEEEEEEEDQEE 782
Query: 402 QQTDASGYKHSK 437
+ D+SG K K
Sbjct: 783 EDEDSSGKKKGK 794
>SB_7044| Best HMM Match : PAN (HMM E-Value=1.3e-07)
Length = 564
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 225 DGCFV*THCYHTESTCCIYQ*FIKLKT*NLIYCIKVRSIH 106
DG T C+H + CC Y+ I ++ + Y K+R +H
Sbjct: 418 DGVAQRTVCFHLDGECCRYKTQIYVRRCHGFYVYKLRELH 457
>SB_7690| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 430
Score = 29.9 bits (64), Expect = 1.4
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +3
Query: 234 SSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTD 413
S S + E E+DS E R H E+KRR+ +K + L++ VP + +
Sbjct: 332 SGSGDSDESENDS-----------EYTRATHNVLERKRRNDLKLKFQKLRDAVPELKDNE 380
Query: 414 ASGYKHSKAAVLQKSIDYIQYL 479
+ K ++L+KS ++I L
Sbjct: 381 ----RAPKVSILRKSWEHIVQL 398
>SB_1992| Best HMM Match : Geminin (HMM E-Value=0.0018)
Length = 155
Score = 29.5 bits (63), Expect = 1.8
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +3
Query: 198 SSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQ-AEQKRRDAIKKGYD 374
SS S SSS Q T+D+ S ++A AL +E E++ Q ++RR A+++ +
Sbjct: 67 SSDSSDTESTKRSSSEQVTDDDKKSVSDEAFALMIQEPAPESYWQLLAEERRLALQETLE 126
Query: 375 SLQELV 392
Q +V
Sbjct: 127 ENQRMV 132
>SB_899| Best HMM Match : Alpha_L_fucos (HMM E-Value=0)
Length = 1127
Score = 29.5 bits (63), Expect = 1.8
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +3
Query: 231 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQE 386
P + N+ D+DD D F+ + ++ ++ K+R + KKG++ Q+
Sbjct: 1038 PGAKNKKKHDDDDDDDEGGGDDKFEPKHKKKG-RSSSKKRHSRKKGHEEQQK 1088
>SB_54715| Best HMM Match : Hexapep (HMM E-Value=1.2e-05)
Length = 1143
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +3
Query: 225 QTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQE 386
+T S +T D D S D+ ++ S +ER + H + ++KR+ IKK E
Sbjct: 745 ETKKSRKYSTTDSDCSSDDGENSDSSRERSIKKH-KKKKKRKKKIKKNRKKTME 797
>SB_41073| Best HMM Match : GRP (HMM E-Value=2.8)
Length = 305
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 150 STL*ITDICNMYSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDN 281
S L + I +R G +G Q H+ ++N N D D+ DN
Sbjct: 9 SDLLLAGILVAEARKGGNGYFQTTHRELDNNNDNDNDNDNDNDN 52
>SB_45809| Best HMM Match : Vicilin_N (HMM E-Value=4.5)
Length = 215
Score = 29.1 bits (62), Expect = 2.4
Identities = 16/62 (25%), Positives = 34/62 (54%)
Frame = +3
Query: 252 TEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYKH 431
+ D DD K S+ S K+R R + +++ ++RR + + DS + + +++ +S +H
Sbjct: 5 SSDSDDDRRRKRSSKSSKKRDRRSRSRSRERRRRSKSRDRDS-RSRTSSRRRSRSSERRH 63
Query: 432 SK 437
K
Sbjct: 64 RK 65
>SB_38740| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 270
Score = 29.1 bits (62), Expect = 2.4
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 306 ERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGY-KHSKAAVLQKSIDYIQ 473
+RRR E+ RR+ I L+ LV + D S Y + KA +L+ ++ YI+
Sbjct: 21 KRRRIMKPITERLRRERINSSLKELKFLVLSALGQDVSRYSRMEKADILEMTVSYIR 77
>SB_39750| Best HMM Match : Borrelia_orfA (HMM E-Value=1.1)
Length = 810
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +3
Query: 231 PSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSL 380
PSS + S NK S +SF + + E+++++ + K Y ++
Sbjct: 371 PSSKSHKKSSSKSSSSNKLSKISFLRKLMDGKILTEEQKKEELAKLYAAI 420
>SB_36889| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +1
Query: 214 KTSIKLRRLLIKIQKTKMTVEIIRHRHLVLKKGEEKLTPKQNRNEEMP 357
K +IKLRR+ +K +KT + V + + + EE L K R P
Sbjct: 213 KDAIKLRRVPLKAEKTPLEVPLEVGTEVYIAVNEEDLQAKGRRRATDP 260
>SB_26233| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 463
Score = 28.3 bits (60), Expect = 4.2
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 234 SSSNQNTEDEDDSGD-NKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQT 410
SS + +D D +G+ +K+ + S + E + E+K+ KKG Q+ P ++
Sbjct: 184 SSDSDGEDDRDGNGEQSKSGSESDDDEEEEEEEEKEEKKLTQKKKGKTPEQKKTPGTKKA 243
Query: 411 DASGYKH 431
AS +H
Sbjct: 244 -ASKQRH 249
>SB_45371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 28.3 bits (60), Expect = 4.2
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 189 RCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRR 350
R G SG + ++ +SN T+ +DDS D K ++R+++ ++ E+KR+
Sbjct: 89 RWGHSG-YKELYPEEFASNF-TDSDDDSEDEKKKKKKTSKKRKKSSSKDERKRK 140
>SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 27.9 bits (59), Expect = 5.6
Identities = 15/70 (21%), Positives = 30/70 (42%)
Frame = +3
Query: 180 MYSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAI 359
M+ + SG + + ++ + Q E+E +K ++ + R + + K
Sbjct: 387 MFEKISRSGELADSYEKKKAEMQKAEEETSFNYHKKKGIAAERREAKQEKEEADKYNKWN 446
Query: 360 KKGYDSLQEL 389
+ DSLQEL
Sbjct: 447 QDLVDSLQEL 456
>SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 736
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -1
Query: 225 DGCFV*TH-CYHTESTCCIYQ*FIKLK 148
DGC V CYH +CC + +IK++
Sbjct: 75 DGCLVTRKVCYHWSGSCCRWSNYIKVR 101
>SB_39365| Best HMM Match : HLH (HMM E-Value=5.5e-07)
Length = 105
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +3
Query: 336 EQKRRDAIKKGYDSLQELVPTCQQTDASGYKHSKAAVLQKSIDYIQYL 479
++KR AI++ + L L+P D K SK +LQ +I+YI+ L
Sbjct: 44 QRKREYAIREALNHLNSLLPL----DNPNRKLSKNMILQTAIEYIRSL 87
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/29 (37%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = +3
Query: 195 GSSGSIQNIHQT-PSSSNQNTEDEDDSGD 278
G +G N+H++ P ++N +D+DD+GD
Sbjct: 783 GETGEEFNLHRSRPLIHDENDDDDDDNGD 811
>SB_12754| Best HMM Match : Vicilin_N (HMM E-Value=0.49)
Length = 440
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Frame = +3
Query: 222 HQTPSSSN--QNTEDEDDSGDNKASALSFKERRR-EAHTQAEQKRRDAIKKGYDSLQELV 392
HQ SS+ + +E + +NKA L + + + H + + + IKK D QELV
Sbjct: 98 HQLRESSSKIEKLTEEKLTAENKAQGLQVELKTNLQRHEEKAKSLNEMIKKEIDKRQELV 157
Query: 393 PTCQ 404
Q
Sbjct: 158 NEMQ 161
>SB_53398| Best HMM Match : RVT_1 (HMM E-Value=7.8e-12)
Length = 924
Score = 27.5 bits (58), Expect = 7.4
Identities = 13/60 (21%), Positives = 32/60 (53%)
Frame = +1
Query: 193 VVAVGLYKTSIKLRRLLIKIQKTKMTVEIIRHRHLVLKKGEEKLTPKQNRNEEMPLRKDM 372
++A L + +++RL I++QK +TV + + + + + ++ NE+ L +D+
Sbjct: 626 IMAKPLSQAPCRIQRLPIRLQKYNITVRFVPGKEMFIADTLSRAFLIEDTNEQQDLNEDI 685
>SB_2026| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1789
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +3
Query: 210 IQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQEL 389
+++ + SN++ +D+S D A + + E T AE K+ + DS +
Sbjct: 1641 VEDDEKKADDSNEDIGKKDESRDQAEDAKKEESKTEEMETDAESKQEETGNATVDSTK-- 1698
Query: 390 VPTCQQTD 413
PT + D
Sbjct: 1699 -PTAEAKD 1705
>SB_35674| Best HMM Match : SH2 (HMM E-Value=0)
Length = 871
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/68 (23%), Positives = 30/68 (44%)
Frame = +3
Query: 210 IQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRDAIKKGYDSLQEL 389
+++ + SN++ +D+S D A + + E T AE K+ + DS +
Sbjct: 220 VEDDEKKADDSNEDIGKKDESRDQAEDAKKEESKTEEMETDAESKQEETGNATVDSTK-- 277
Query: 390 VPTCQQTD 413
PT + D
Sbjct: 278 -PTAEAKD 284
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 332 LGVSFSSPFFKTKCRCLIIS-TVIFVFCILI 243
LGV+++ F CR L++S T++ + C L+
Sbjct: 309 LGVTYAGKFTMAHCRALLVSLTILILPCYLV 339
>SB_59802| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3213
Score = 27.1 bits (57), Expect = 9.8
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +3
Query: 303 KERRREAHTQAEQKRRDAIKKGYDSLQELVPTCQQTDASGYK 428
K + EA A + DAI + SL P+CQ+T S K
Sbjct: 1833 KHQTFEAEVSAHKSELDAITQTGQSLMRNSPSCQETVESRLK 1874
>SB_56230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 996
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 183 YSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDN 281
YS S + + S S+ N +D+DD+GD+
Sbjct: 933 YSDSDSDSDSDSDSDSDSDSHHNNDDDDDNGDD 965
>SB_55724| Best HMM Match : SURF6 (HMM E-Value=0.62)
Length = 1105
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/46 (23%), Positives = 20/46 (43%)
Frame = +3
Query: 216 NIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQKRRD 353
N H + S +++ T+D + + + +SF H A R D
Sbjct: 188 NTHSSLSDTSEKTKDRQQTSAKQGNTMSFSSIDNSKHGHANTTRED 233
>SB_36160| Best HMM Match : TFIIF_alpha (HMM E-Value=0)
Length = 603
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/75 (21%), Positives = 29/75 (38%)
Frame = +3
Query: 162 ITDICNMYSRCGSSGSIQNIHQTPSSSNQNTEDEDDSGDNKASALSFKERRREAHTQAEQ 341
+ D + ++ S S IH + +D++D DN+ KE++ + +
Sbjct: 221 VEDSSDSKAKLTSLASSMKIHDNDDLDLSDDDDDNDDDDNEDDNSVKKEKKTGQQNKKKG 280
Query: 342 KRRDAIKKGYDSLQE 386
K KK D E
Sbjct: 281 KSASKAKKNSDDESE 295
>SB_13005| Best HMM Match : PSI (HMM E-Value=2.9e-11)
Length = 829
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2
Query: 353 ISSFLFCLGVSFSS 312
ISSFLFC+G S SS
Sbjct: 86 ISSFLFCIGTSISS 99
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,198,054
Number of Sequences: 59808
Number of extensions: 306234
Number of successful extensions: 1602
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1558
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1227799733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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