Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M19
         (377 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            30   0.032
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   0.70 
CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.          23   3.7  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 29.9 bits (64), Expect = 0.032
 Identities = 13/57 (22%), Positives = 33/57 (57%)
 Frame = +2

Query: 8   THSIYTINFVKMKVAPVLFVVLLSLMCVVQCKDLIVGTSFNNRLIWQEKADYNAIPL 178
           T ++YT+N +K  +   +  +++ ++   +CKD+ +    ++R  W+++  Y+  PL
Sbjct: 747 TETVYTLNDIKRYLVHAIENLIVVIVIYDKCKDVAILQYTSDR--WRQQKYYDEFPL 801


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = +2

Query: 260  TDAIASITAGGVGFSYVNI 316
            T AI  ITA  VGF+YV+I
Sbjct: 2755 TAAIGVITATSVGFAYVSI 2773


>CR954256-2|CAJ14143.1|  295|Anopheles gambiae cyclin protein.
          Length = 295

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 131 Y*SLYLQLNLYIARHTLRIEEQQTK 57
           Y  LYL L   ++  + R++++QTK
Sbjct: 166 YSKLYLLLKATLSAQSFRVQKKQTK 190


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,730
Number of Sequences: 2352
Number of extensions: 8734
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 28646721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)