Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M19
         (377 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g79720.1 68414.m09298 aspartyl protease family protein contai...    29   1.4  
At4g35640.1 68417.m05061 serine O-acetyltransferase, putative si...    27   4.1  
At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing pro...    26   7.2  
At4g15093.1 68417.m02319 catalytic LigB subunit of aromatic ring...    26   7.2  
At5g40450.1 68418.m04905 expressed protein                             26   9.6  
At3g11950.1 68416.m01473 UbiA prenyltransferase family protein c...    26   9.6  
At2g34357.1 68415.m04206 expressed protein                             26   9.6  
At2g17640.1 68415.m02040 serine O-acetyltransferase, putative (S...    26   9.6  

>At1g79720.1 68414.m09298 aspartyl protease family protein contains
           Pfam domain, PF00026: eukaryotic aspartyl protease
          Length = 484

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 35  VKMKVAPVLFVVLLSLMCVVQCKDLIVGTSFNNRLIWQEKADYNA 169
           + + +AP+L V L  L CVV   D     S +N  IW  K  Y A
Sbjct: 7   LNLSLAPLLLVFLFLLSCVVHGVDEKKILSVHNN-IWSPKKSYEA 50


>At4g35640.1 68417.m05061 serine O-acetyltransferase, putative
           similar to serine acetyltransferase, Arabidopsis
           thaliana, GI:905391; contains Pfam profile PF00132:
           Bacterial transferase hexapeptide (four repeats)
          Length = 355

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
 Frame = +2

Query: 140 IWQEKADYNAIPLKKRVKEVFFSD--PGQQIIKGVIARDLDH-TDAIASITA 286
           +W++     A+ L+ RV EVF  D  P  +I KG++   LDH T  +   TA
Sbjct: 184 LWKQGRKLLALALQSRVSEVFGIDIHPAARIGKGIL---LDHGTGVVIGETA 232


>At4g32200.1 68417.m04582 DNA-binding HORMA domain-containing
           protein similar to meiotic asynaptic mutant 1
           [Arabidopsis thaliana] GI:7939627, aysnaptic 1 [Brassica
           oleracea var. alboglabra] GI:23506946; contains Pfam
           profile PF02301: HORMA domain
          Length = 1399

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 19/66 (28%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = +2

Query: 14  SIYTINFVKMKVAPVLFVVLLSLMCV-VQCKDLIVGTSFNNRLI-WQEKADYNAIPLKKR 187
           +I+ I++++  + PV +   +S+  + ++ K L+   + + RLI W EK  Y+A+  KK 
Sbjct: 23  AIFNISYIR-GLFPVRYFKDMSVPALDLKMKKLMPMDAESRRLIGWMEKGVYDALH-KKH 80

Query: 188 VKEVFF 205
           +K++ F
Sbjct: 81  LKKLIF 86


>At4g15093.1 68417.m02319 catalytic LigB subunit of aromatic
           ring-opening dioxygenase family contains Pfam PF02900:
           Catalytic LigB subunit of aromatic ring-opening
           dioxygenase
          Length = 269

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +2

Query: 167 AIPLKKRVKEVFFSDPGQQIIKGVIARDLDH 259
           AI L KRVKE+   + G + +     R LDH
Sbjct: 87  AIELGKRVKELLMKEGGMKRVDEDTKRGLDH 117


>At5g40450.1 68418.m04905 expressed protein
          Length = 2910

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = +2

Query: 101  KDLIVGTSFNNRLIWQEKADYNAIPLKKRVKEVFFSDPGQQIIKGVI--ARDLDHTDAIA 274
            ++L VG  F +R   +E+  +NA+  ++ + EV  S+       GVI  A + +H D + 
Sbjct: 2425 RELEVGNDFVSRDGEKEEVPHNALENEEEMNEVVASEKQISDPVGVIKKASEAEHEDPVD 2484

Query: 275  SI 280
             I
Sbjct: 2485 DI 2486


>At3g11950.1 68416.m01473 UbiA prenyltransferase family protein
           contains Pfam profile PF01040: UbiA prenyltransferase
           family
          Length = 954

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 34  CKNEGCTSFVCCSSILN 84
           C+NEGCT+  C + + N
Sbjct: 195 CENEGCTAVFCANQMEN 211


>At2g34357.1 68415.m04206 expressed protein
          Length = 1280

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 136 TNMARKSRLQCHPIEEKS*RSFLFGSWATNYKGCNCP 246
           ++ A+K +LQ  P+  +S  S ++  WA     CN P
Sbjct: 529 SHKAQKLKLQGLPVASRSVDSLVYSLWALLPSFCNYP 565


>At2g17640.1 68415.m02040 serine O-acetyltransferase, putative
           (SAT-106) similar to Arabidopsis thaliana serine
           acetyltransferase GI:905391
          Length = 323

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = +2

Query: 140 IWQEKADYNAIPLKKRVKEVFFSD--PGQQIIKGVIARDLDH-TDAIASITA 286
           +W E     A+ L+ R+ EVF  D  P  +I +G++   LDH T  +   TA
Sbjct: 147 LWNEGRKLLALALQSRISEVFGIDIHPAARIGEGIL---LDHGTGVVIGETA 195


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,446,644
Number of Sequences: 28952
Number of extensions: 172966
Number of successful extensions: 404
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 404
length of database: 12,070,560
effective HSP length: 73
effective length of database: 9,957,064
effective search space used: 517767328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)