Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_M18
(591 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1721 - 39426957-39428005,39428812-39428839 227 7e-60
05_04_0255 + 19462668-19462695,19463443-19464491 225 2e-59
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 221 3e-58
08_01_0142 - 1121762-1122822,1123087-1123114 219 1e-57
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 181 3e-46
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 89 2e-18
07_03_0473 - 18525712-18525858,18526049-18526162,18526442-185265... 32 0.30
06_02_0238 - 13357877-13357954,13358186-13358302,13358537-133586... 32 0.39
12_01_0787 + 7189305-7189464,7189790-7189854 31 0.91
04_03_0851 + 20285996-20286128,20286217-20286290,20286376-202864... 31 0.91
06_03_0608 + 22705321-22705652,22705809-22706178,22706264-227066... 29 2.1
12_01_0899 - 8689125-8689383,8689540-8689826 29 2.8
08_01_0178 - 1509100-1511214 29 2.8
07_01_0566 + 4207894-4207974,4208090-4208144,4208671-4208759,420... 29 3.7
02_03_0183 + 16106205-16106474 28 4.8
07_03_1620 - 28180020-28180862 28 6.4
03_05_0306 - 22956474-22956980 28 6.4
03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187 28 6.4
07_03_1473 + 26756338-26757583,26759067-26759472,26760867-267609... 27 8.5
06_01_0497 + 3555919-3557154,3557815-3558143,3558177-3558775,355... 27 8.5
06_01_0191 + 1478267-1478929,1480579-1480789,1482625-1482925,148... 27 8.5
03_06_0656 - 35330109-35331011,35331154-35331360,35331455-353316... 27 8.5
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 227 bits (554), Expect = 7e-60
Identities = 113/190 (59%), Positives = 135/190 (71%)
Frame = +3
Query: 6 PSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALS 185
PS +I NA LARYA ICQ +VPIVEPE+L DG HD++R VTE VLAA YKAL+
Sbjct: 154 PSQLSIDLNAQGLARYAIICQENGLVPIVEPEILVDGSHDIERCAYVTEKVLAACYKALN 213
Query: 186 DHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSGGQSEE 365
+HHV LEG+LLKPNMVT G KK +P IA TV AL RTVPAAVP + FLSGGQSEE
Sbjct: 214 EHHVLLEGSLLKPNMVTPGSESKKV-SPQLIAEYTVRALQRTVPAAVPAIVFLSGGQSEE 272
Query: 366 EASVNLNAINSVDLKRPWVLTFSYGRALQASVVRAWAGKEDNVPVGQQELIKRAKANGLA 545
EA+VNLNA+N + K+PW L+FS+GRALQ S ++AW GK +NV Q+ I R KAN A
Sbjct: 273 EATVNLNAMNKLSTKKPWALSFSFGRALQQSTLKAWGGKTENVVKAQKAFITRCKANSEA 332
Query: 546 ATGKYVAGSI 575
G Y ++
Sbjct: 333 TLGTYQGDAV 342
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 225 bits (550), Expect = 2e-59
Identities = 111/190 (58%), Positives = 135/190 (71%)
Frame = +3
Query: 6 PSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALS 185
PS AI NA LARYA ICQ +VPIVEPE+L DG HD+DR V+EVVLAA YKAL+
Sbjct: 154 PSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDGPHDIDRCAYVSEVVLAACYKALN 213
Query: 186 DHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSGGQSEE 365
+HHV LEGTLLKPNMVT G KK +P IA TV L RTVPAAVP + FLSGGQSEE
Sbjct: 214 EHHVLLEGTLLKPNMVTPGSDAKKV-SPEVIAEYTVRTLQRTVPAAVPAIVFLSGGQSEE 272
Query: 366 EASVNLNAINSVDLKRPWVLTFSYGRALQASVVRAWAGKEDNVPVGQQELIKRAKANGLA 545
EA++NLNA+N + K+PW L+FS+GRALQ S ++AW+GK +N+ + + R KAN A
Sbjct: 273 EATLNLNAMNKLSTKKPWSLSFSFGRALQQSTLKAWSGKAENIEKARAAFLTRCKANSEA 332
Query: 546 ATGKYVAGSI 575
G Y ++
Sbjct: 333 TLGTYKGDAV 342
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 221 bits (540), Expect = 3e-58
Identities = 109/185 (58%), Positives = 129/185 (69%)
Frame = +3
Query: 6 PSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALS 185
PS A+ +NA LARYA ICQ +VPIVEPE+L DG HD+ VTE VLAAVYK+L+
Sbjct: 346 PSELAVKQNAEGLARYALICQENGLVPIVEPEILTDGAHDIKTCAAVTERVLAAVYKSLN 405
Query: 186 DHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSGGQSEE 365
DH V LEGTLLKPNMVT G K + I TV AL RTVP AVPG+ FLSGGQSEE
Sbjct: 406 DHKVLLEGTLLKPNMVTPGSDSPKVGAEV-IGEYTVAALRRTVPPAVPGIVFLSGGQSEE 464
Query: 366 EASVNLNAINSVDLKRPWVLTFSYGRALQASVVRAWAGKEDNVPVGQQELIKRAKANGLA 545
EAS NLNA+N +++ +PW LTFS+GRALQ S ++ W GK++NV Q + R KAN A
Sbjct: 465 EASQNLNAMNKLEVLKPWTLTFSFGRALQQSTIKKWGGKKENVAAAQAAFLARCKANSEA 524
Query: 546 ATGKY 560
GKY
Sbjct: 525 TLGKY 529
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 219 bits (535), Expect = 1e-57
Identities = 113/187 (60%), Positives = 131/187 (70%), Gaps = 2/187 (1%)
Frame = +3
Query: 6 PSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALS 185
PS A+ NA LARYA ICQ +VPIVEPE+L DGEH ++ +VTE VLAA YKALS
Sbjct: 156 PSQLAVDANAQGLARYAIICQENGLVPIVEPEILVDGEHGIEACAEVTERVLAACYKALS 215
Query: 186 DHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSGGQSEE 365
DHHV LEGTLLKPNMVT G + P +A TV ALLRTVP AVP + FLSGGQSEE
Sbjct: 216 DHHVLLEGTLLKPNMVTPGSDAARA-PPEVVAEHTVRALLRTVPPAVPAIVFLSGGQSEE 274
Query: 366 EASVNLNAINSVDL--KRPWVLTFSYGRALQASVVRAWAGKEDNVPVGQQELIKRAKANG 539
EA+ NLNA+N V K+PW LTFS+GRALQ S ++AWAGK +NV Q L+ R +AN
Sbjct: 275 EATRNLNAMNQVASRGKKPWSLTFSFGRALQQSTLKAWAGKAENVGKAQAALLARCRANS 334
Query: 540 LAATGKY 560
A G Y
Sbjct: 335 QATLGAY 341
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 181 bits (441), Expect = 3e-46
Identities = 92/187 (49%), Positives = 122/187 (65%)
Frame = +3
Query: 6 PSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALS 185
PS A+ E A LARYA+I Q +VPIVEPE+L DGEH +DR +V + V A + ++
Sbjct: 186 PSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAETFFYMA 245
Query: 186 DHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSGGQSEE 365
+++V EG LLKP+MVT G CK TP ++ T+ L R +P AVPG+ FLSGGQSE
Sbjct: 246 ENNVMFEGILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEV 305
Query: 366 EASVNLNAINSVDLKRPWVLTFSYGRALQASVVRAWAGKEDNVPVGQQELIKRAKANGLA 545
EA+ NLNA+N PW ++FSY RALQ + ++ W G+ +NV Q L+ RAKAN LA
Sbjct: 306 EATQNLNAMNQG--PNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLA 363
Query: 546 ATGKYVA 566
GKY +
Sbjct: 364 QLGKYTS 370
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 89.4 bits (212), Expect = 2e-18
Identities = 58/155 (37%), Positives = 83/155 (53%), Gaps = 4/155 (2%)
Frame = +3
Query: 78 IVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNMVTAGQSCKK 257
+VPIVEPE+L DGEH ++R +V + V A + +S+++V LEG LLKP+MVT G K
Sbjct: 263 LVPIVEPEILLDGEHRVERTFEVAQKVWADTFFHMSENNVMLEGILLKPSMVTPGAESKD 322
Query: 258 -TYTPMDIARATVTALLRTVPAAVPGVTFLSGGQSEEEASVNLNAIN-SVDLKRP--WVL 425
TP +A A+ R PA+ NLNA+N + P W +
Sbjct: 323 GAATPEQVAAAS----RRRCPASCSS----PAASRRWRRRGNLNAMNQAAPSANPWRWRV 374
Query: 426 TFSYGRALQASVVRAWAGKEDNVPVGQQELIKRAK 530
+FSY RALQ + ++ W + +NV Q EL A+
Sbjct: 375 SFSYARALQNTCLKTWGSRRENVAAAQGELAGAAR 409
>07_03_0473 -
18525712-18525858,18526049-18526162,18526442-18526522,
18526787-18526865,18526902-18526996,18527092-18527170,
18527339-18527450,18527682-18527770,18527868-18527938,
18528846-18528962
Length = 327
Score = 32.3 bits (70), Expect = 0.30
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = +3
Query: 291 VTALLRTVPAAVPGVTFLSGGQSEEEASVNLNAINS 398
+ AL R + AA+PG+ LS + E+ VNL + N+
Sbjct: 278 IKALFRKIAAALPGMETLSSAKQEDMVDVNLKSSNA 313
>06_02_0238 -
13357877-13357954,13358186-13358302,13358537-13358641,
13359301-13359393,13359801-13359888,13359979-13360028,
13361147-13361205,13361297-13361516,13361611-13361691,
13364034-13364111,13364203-13364298,13364370-13364435
Length = 376
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +3
Query: 285 ATVTALLRTVPAAVPGVTFLSGGQSEEEASVNLNAINSVDLKRPWVLTFSYGRALQASV 461
A VTALL +VP + P SGG+ + + LN + +D+ R ++L G ++ V
Sbjct: 131 AAVTALLCSVPISGPSDAASSGGKDKAKKPTRLNIV-GLDITRQFLLHIVSGTDVEKDV 188
>12_01_0787 + 7189305-7189464,7189790-7189854
Length = 74
Score = 30.7 bits (66), Expect = 0.91
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +3
Query: 342 LSGGQSEEEASVNLNAINSVDLKRPWVLTFSYGRALQASVVRAWAGKED 488
L G S E+ +V + + DLK +LT Y A++V AWA E+
Sbjct: 13 LGGSPSLEQPAV-AHPLVVADLKASLLLTVQYNATTTAAIVAAWAADEE 60
>04_03_0851 +
20285996-20286128,20286217-20286290,20286376-20286494,
20287169-20287252,20287974-20288079
Length = 171
Score = 30.7 bits (66), Expect = 0.91
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +1
Query: 451 RLPWSVLGPAKRIMFPLDSRNSSSVPRRTVSQPPANTSPDLSRRWLL 591
R WS+ G L++ NS V R + S P T+P + +RW L
Sbjct: 124 RQRWSLHGQLGDTRKRLEALNSGIVKRGSQSSPVQETTPAVRKRWFL 170
>06_03_0608 +
22705321-22705652,22705809-22706178,22706264-22706656,
22707183-22707204,22707257-22707928,22708019-22708494
Length = 754
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 433 ATGALSRLPWSVLGPAKRIMFPLDSRNSSSVPRRTVSQPP 552
ATGA S LP G A R++ P + R + +PP
Sbjct: 2 ATGAASLLPQPARGAAARLLLPASGAARGAAARLPLPEPP 41
>12_01_0899 - 8689125-8689383,8689540-8689826
Length = 181
Score = 29.1 bits (62), Expect = 2.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 439 GALSRLPWSVLGPAKRIMFPLDSRNSSSVPRRTVSQPP 552
GA SRLP G A R++ P +V R + +PP
Sbjct: 2 GADSRLPQPARGAAARLLLPASGAARGAVARLPLPEPP 39
>08_01_0178 - 1509100-1511214
Length = 704
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 19 PSWRMPMCWLATPPS 63
P+W MPMC A PPS
Sbjct: 636 PTWSMPMCGSAAPPS 650
>07_01_0566 +
4207894-4207974,4208090-4208144,4208671-4208759,
4209742-4209794,4209966-4210120,4210201-4210528,
4210618-4210730,4211394-4211538,4211951-4212259,
4212340-4212420,4212989-4213349
Length = 589
Score = 28.7 bits (61), Expect = 3.7
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = -1
Query: 168 RQPVRLL--SPSERGPSR--ARHQAKPQAQLLARYADSGRWRRSEPTHWHS 28
R PVR SP PSR R +++ +++ RY + G +RR P H S
Sbjct: 453 RSPVRRYRGSPRASSPSRYPRRDRSRSRSRSPLRYRERGGYRRPSPRHSRS 503
>02_03_0183 + 16106205-16106474
Length = 89
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/66 (31%), Positives = 31/66 (46%)
Frame = +2
Query: 149 RSRTGCRIQGTQRPPRLP*GNPSQT*YGYRWSVVQEDLHSNGYRTRHCHRFTQDRTCRCP 328
RSR GC + + PP +P G+P+ R + L S+ H HRF++ C
Sbjct: 24 RSRRGCNEEMSWTPPSVP-GSPAAEGASLRAPTLPPPLASS-----HEHRFSRLHGCLPE 77
Query: 329 WSHFPL 346
S FP+
Sbjct: 78 SSGFPV 83
>07_03_1620 - 28180020-28180862
Length = 280
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 230 GYR-WSVVQEDLHSNGYRTRHCHRFTQDRTCRCPWSH 337
G+R W+ + ED + Y+ + C R + CP++H
Sbjct: 38 GHRLWASMSEDFWIHVYKVQRCPRSSSHDWTSCPYAH 74
>03_05_0306 - 22956474-22956980
Length = 168
Score = 27.9 bits (59), Expect = 6.4
Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Frame = -1
Query: 72 DSGRW-RRSEPTHWHSPRWL 16
+ G W RR+ P W PRWL
Sbjct: 59 EHGAWSRRASPASWGEPRWL 78
>03_02_0461 - 8658494-8658876,8659791-8659859,8661746-8662187
Length = 297
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 117 EHDLDRAQKVTEVVLAAVYKALSDHH 194
E L+R V ++ LAA KA SDHH
Sbjct: 202 EDILNRTTTVEDISLAAASKATSDHH 227
>07_03_1473 +
26756338-26757583,26759067-26759472,26760867-26760930,
26760975-26761055,26763350-26763588,26763689-26763947,
26764359-26764538,26764937-26765092,26765174-26765350
Length = 935
Score = 27.5 bits (58), Expect = 8.5
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Frame = -2
Query: 500 NGNIILFAGP--STDHGSLESAPV-AERQYPGSLQIDRVDS-IQVNGSLLFRLATREESD 333
+G I+ GP S +G P P L + R +++NG+L+ + E
Sbjct: 283 HGRILAVEGPQNSVSNGVDPKVPQNGSETLPALLYLPRNGKHVKINGNLVIKSIVASEKA 342
Query: 332 SRDSGRYGPE*SGDSGACDIHWSV-SLLARLTSGNHIRFEKG 210
S YG + SG+ G + ++ +A L +G + KG
Sbjct: 343 SSRLSNYGEKGSGNQGKEETSLAIPGYVAPLEAGEVMDSAKG 384
>06_01_0497 +
3555919-3557154,3557815-3558143,3558177-3558775,
3558919-3560393
Length = 1212
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +3
Query: 222 PNMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSGGQSEEEASVNLNAINSV 401
P T G+ C++ + P+D A + + A+ P + F GG + S + +
Sbjct: 590 PRQPTCGRRCRRPWQPVDDEEAPAASRQASSRASRPLLAFSFGGARTQNPS-SCSEEGHG 648
Query: 402 DLKRPWVLTFSYG 440
D + W+L + G
Sbjct: 649 DGRWWWMLALAVG 661
>06_01_0191 +
1478267-1478929,1480579-1480789,1482625-1482925,
1483217-1483612,1483993-1484070,1484166-1484373
Length = 618
Score = 27.5 bits (58), Expect = 8.5
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 230 GYRWSVVQEDLHSNGYRTRHCHRFTQDRTCRCP---WSHFPLWWP 355
G RWS+ ++ YR RHC + R C P PL WP
Sbjct: 102 GQRWSL-RQPRRRFAYRERHCPPPAERRRCLVPAPRGYRAPLRWP 145
>03_06_0656 -
35330109-35331011,35331154-35331360,35331455-35331632,
35331726-35332221,35332889-35333033
Length = 642
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = -1
Query: 162 PVRLLSPSERGPSRARHQAKPQAQLLARYADSG 64
P ++ S S+ S A QA+PQAQ L+ + SG
Sbjct: 552 PEKVQSQSQASSSPAPAQAQPQAQTLSSSSSSG 584
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,025,069
Number of Sequences: 37544
Number of extensions: 388830
Number of successful extensions: 1476
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -