Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M18
         (591 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)                 281   3e-76
SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)                 128   3e-30
SB_39902| Best HMM Match : Glycolytic (HMM E-Value=1.2)                83   1e-16
SB_14578| Best HMM Match : Gal_Lectin (HMM E-Value=0.72)               33   0.23 
SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.6  
SB_147| Best HMM Match : LepA_C (HMM E-Value=0.73)                     29   2.1  
SB_45705| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   2.8  
SB_47366| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_36654| Best HMM Match : p450 (HMM E-Value=1.3e-27)                  27   8.7  
SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  
SB_25597| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.7  

>SB_26182| Best HMM Match : Glycolytic (HMM E-Value=0)
          Length = 949

 Score =  281 bits (689), Expect = 3e-76
 Identities = 134/188 (71%), Positives = 153/188 (81%)
 Frame = +3

Query: 6   PSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALS 185
           PS  A+ ENANVLARYASICQ   +VPIVEPEVL DG+H L+RAQKVTE VL+A YKAL 
Sbjct: 157 PSELAMKENANVLARYASICQQNGLVPIVEPEVLCDGDHTLERAQKVTEAVLSATYKALM 216

Query: 186 DHHVYLEGTLLKPNMVTAGQSCKKTYTPMDIARATVTALLRTVPAAVPGVTFLSGGQSEE 365
           DHH+YLEGTLLKPNMVTAGQSC   YTP   A+ATVTAL RTVP A+PGVTFLSGGQSEE
Sbjct: 217 DHHIYLEGTLLKPNMVTAGQSCPTKYTPEQCAQATVTALARTVPPAMPGVTFLSGGQSEE 276

Query: 366 EASVNLNAINSVDLKRPWVLTFSYGRALQASVVRAWAGKEDNVPVGQQELIKRAKANGLA 545
           +A+++LNAIN    K+PW LTFS+GRALQAS ++AW+GK   V  GQ+E +KRAKANG A
Sbjct: 277 QATIHLNAINQYQGKKPWKLTFSFGRALQASALKAWSGKSGCVKAGQEEFLKRAKANGQA 336

Query: 546 ATGKYVAG 569
           A GKY  G
Sbjct: 337 AMGKYAGG 344


>SB_28080| Best HMM Match : Glycolytic (HMM E-Value=0)
          Length = 304

 Score =  128 bits (310), Expect = 3e-30
 Identities = 61/78 (78%), Positives = 67/78 (85%)
 Frame = +3

Query: 6   PSYQAILENANVLARYASICQSQRIVPIVEPEVLPDGEHDLDRAQKVTEVVLAAVYKALS 185
           PS  A+ ENANVLARYASICQ   +VPIVEPEVL DG+H L+RAQKVTE VL+A YKAL 
Sbjct: 157 PSELAMKENANVLARYASICQQNGLVPIVEPEVLCDGDHTLERAQKVTEAVLSATYKALM 216

Query: 186 DHHVYLEGTLLKPNMVTA 239
           DHH+YLEGTLLKPNMVTA
Sbjct: 217 DHHIYLEGTLLKPNMVTA 234


>SB_39902| Best HMM Match : Glycolytic (HMM E-Value=1.2)
          Length = 71

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 36/54 (66%), Positives = 43/54 (79%)
 Frame = +3

Query: 408 KRPWVLTFSYGRALQASVVRAWAGKEDNVPVGQQELIKRAKANGLAATGKYVAG 569
           K+PW LTFS+GRALQAS ++AW+GK D V  GQ+E +KRAKANG AA GKY  G
Sbjct: 2   KKPWKLTFSFGRALQASALKAWSGKSDCVKAGQEEFLKRAKANGQAAMGKYAGG 55


>SB_14578| Best HMM Match : Gal_Lectin (HMM E-Value=0.72)
          Length = 502

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
 Frame = +3

Query: 231 VTAGQSCKKTYTPMDIARATVTALLRTV-PAAVPGVTFLSGGQSEEEASVNLNAINS 398
           VT+ Q   +T  P   +  T T  L+ V P   PG T  S  QSE  AS+     N+
Sbjct: 208 VTSSQFVSETVQPSTTSSETTTTTLKEVKPVETPGSTSSSTSQSEVSASIGTGTGNA 264


>SB_22062| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 275

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 388 AFRLTEASSSDWPPERKVTPGTAAGTVLSKAVTVARAIS 272
           A   + +S S +PPERK+ P TA G V     ++ + IS
Sbjct: 33  ASTFSPSSCSFYPPERKLVPFTALGQVEQDVRSITKHIS 71


>SB_147| Best HMM Match : LepA_C (HMM E-Value=0.73)
          Length = 611

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
 Frame = +1

Query: 430 SATGALSRLPWSVLG--PAKRIMFPLDSRNSSSVPR--RTVSQPPANTS 564
           S++ +LS +P S L   P    + PL S +SSS PR  R +  PP + S
Sbjct: 281 SSSSSLSSVPSSFLASTPRAATLSPLSSSSSSSSPRPSRDIELPPTSPS 329


>SB_45705| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 449

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = -2

Query: 278 DIHWSVSLLAR-LTSGNHIRFEKGSLKVDVVVAECLVYGSQYDFCHLLSAVQVVLAIRQN 102
           D+H   + LA  +T    I  E+   KV     + +  G+    CH L    ++L++RQ 
Sbjct: 94  DLHAKATQLANNVTDQQWIEAEEAKNKVYEEAVQVIPTGTNVTTCHSLDNANIILSVRQP 153

Query: 101 LRLNYWHDTLTLA 63
           +  +   DTL  A
Sbjct: 154 VHQSV--DTLLYA 164


>SB_47366| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 478

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 204 EGTLLKPNMVTAGQSCKKTYTPM 272
           E  L+KP MVTAG  C K   P+
Sbjct: 143 EVMLVKPQMVTAGIDCDKLIAPV 165


>SB_36654| Best HMM Match : p450 (HMM E-Value=1.3e-27)
          Length = 377

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 440 PVAERQYPGSLQIDRVD-SIQVNGSLLFRLATREESDSRDSGRYGPE 303
           PV  RQ P  + ID        N ++LF    R+ES+ +D  ++ PE
Sbjct: 245 PVLPRQVPEDIVIDGYHIPAHTNFNILFYYMGRDESNFKDPLQFKPE 291


>SB_27853| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 642

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 102 VLPDGEHDLDRAQKVTEVVLAAVYKALSDHHVYLEGTLLKPNM 230
           V PDG+    R  KVT++VL   +   ++  V+   +++K NM
Sbjct: 551 VSPDGQPRFPRLSKVTQLVLTIPHSNAAEERVF---SMIKKNM 590


>SB_25597| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 540

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -2

Query: 440 PVAERQYPGSLQIDRVD-SIQVNGSLLFRLATREESDSRDSGRYGPE 303
           PV  RQ P  + ID        N ++LF    R+ES+ +D  ++ PE
Sbjct: 408 PVLPRQVPEDIVIDGYHIPAHTNFNILFYYMGRDESNFKDPLQFKPE 454


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,745,549
Number of Sequences: 59808
Number of extensions: 414930
Number of successful extensions: 1282
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1281
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)