Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M17
         (530 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   1.7  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    21   5.1  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   5.1  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    21   5.1  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.9  

>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 352 SRNVFYYLISFYRHHWNRL 296
           SR + +YLI   R  WN L
Sbjct: 86  SRKIIHYLIDNKRDWWNEL 104


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 352 SRNVFYYLISFYRHHWNRL 296
           SR +  YLI   R  WN L
Sbjct: 84  SRTIIRYLIKNKRDWWNEL 102


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -3

Query: 348 EMYFTISFPS 319
           EMYF ++FPS
Sbjct: 220 EMYFRVAFPS 229


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 352 SRNVFYYLISFYRHHWNRL 296
           SR +  YLI   R  WN L
Sbjct: 84  SRTIIRYLIKNKRDWWNEL 102


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = +2

Query: 419 CPVGWSELW 445
           C +GW E+W
Sbjct: 712 CDLGWVEVW 720


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,598
Number of Sequences: 336
Number of extensions: 3027
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)