Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M17
         (530 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...   263   2e-72
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    24   3.7  
X95913-1|CAA65157.1|  178|Anopheles gambiae immune factor protein.     23   6.4  
AY341182-1|AAR13746.1|  191|Anopheles gambiae Gambif protein.          23   6.4  
AY341181-1|AAR13745.1|  191|Anopheles gambiae Gambif protein.          23   6.4  
AY341180-1|AAR13744.1|  191|Anopheles gambiae Gambif protein.          23   6.4  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score =  263 bits (645), Expect = 2e-72
 Identities = 116/163 (71%), Positives = 128/163 (78%)
 Frame = +2

Query: 41   YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 220
            Y TGILLVRHSQ + VP CEPGH+KLWDGYSLLY+DGN+  HNQDLG AGSCVRKFST+P
Sbjct: 799  YYTGILLVRHSQSDEVPVCEPGHLKLWDGYSLLYVDGNDYPHNQDLGSAGSCVRKFSTLP 858

Query: 221  FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQ 400
             L C  N+VCNYASRNDR++WLST  PIPMMPV  NE+  YISRC VCE P+NVIAVHSQ
Sbjct: 859  ILACGQNNVCNYASRNDRTFWLSTSAPIPMMPVTENEMRPYISRCTVCEAPTNVIAVHSQ 918

Query: 401  TLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
            TL IP CP GW  LWIGYSF+MHT          L+ PGSCLE
Sbjct: 919  TLHIPECPNGWDGLWIGYSFLMHTAVGHGGGGQSLSGPGSCLE 961



 Score = 48.0 bits (109), Expect = 2e-07
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
 Frame = +2

Query: 47   TGILLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPF 223
            T ++ V HSQ   +P+C  G   LW GYS L++         Q L   GSC+  F   PF
Sbjct: 910  TNVIAV-HSQTLHIPECPNGWDGLWIGYSFLMHTAVGHGGGGQSLSGPGSCLEDFRATPF 968

Query: 224  LFCD-LNDVCNYASRNDRSYWL------STGQPIPMMPVEGNEIVKYISRCVVC 364
            + C+     C+Y      S+WL         Q      ++   ++  +SRC VC
Sbjct: 969  IECNGGKGHCHY-YETQTSFWLVSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVC 1021


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 236 LNDVCNYASRNDRSYWLSTGQPIPMMP 316
           L + CN+ +    +YW +T  P+   P
Sbjct: 406 LEEACNHLAEYLEAYWRATHPPVRPTP 432


>X95913-1|CAA65157.1|  178|Anopheles gambiae immune factor protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 390 STARH*TFQVAQ*DGVNCGLVTVLSCIL--APEDK 488
           +TA H TF   Q  G     V V+SC+    PE K
Sbjct: 10  TTAEHKTFPSIQVHGYRGRAVVVVSCVTKEGPEHK 44


>AY341182-1|AAR13746.1|  191|Anopheles gambiae Gambif protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 390 STARH*TFQVAQ*DGVNCGLVTVLSCIL--APEDK 488
           +TA H TF   Q  G     V V+SC+    PE K
Sbjct: 16  TTAEHKTFPSIQVHGYRGRAVVVVSCVTKEGPEHK 50


>AY341181-1|AAR13745.1|  191|Anopheles gambiae Gambif protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 390 STARH*TFQVAQ*DGVNCGLVTVLSCIL--APEDK 488
           +TA H TF   Q  G     V V+SC+    PE K
Sbjct: 16  TTAEHKTFPSIQVHGYRGRAVVVVSCVTKEGPEHK 50


>AY341180-1|AAR13744.1|  191|Anopheles gambiae Gambif protein.
          Length = 191

 Score = 23.0 bits (47), Expect = 6.4
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
 Frame = +3

Query: 390 STARH*TFQVAQ*DGVNCGLVTVLSCIL--APEDK 488
           +TA H TF   Q  G     V V+SC+    PE K
Sbjct: 16  TTAEHKTFPSIQVHGYRGRAVVVVSCVTKEGPEHK 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,915
Number of Sequences: 2352
Number of extensions: 13435
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49051644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)