Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_M17
(530 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 262 1e-70
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 262 1e-70
J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV) co... 260 3e-70
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 258 2e-69
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 258 2e-69
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 258 2e-69
Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical pr... 217 5e-57
Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical pr... 217 5e-57
X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) coll... 217 5e-57
J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein. 217 5e-57
Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical pr... 28 4.8
U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical pr... 27 6.3
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical... 27 8.4
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 262 bits (642), Expect = 1e-70
Identities = 112/163 (68%), Positives = 127/163 (77%)
Frame = +2
Query: 41 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 220
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1528 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1587
Query: 221 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQ 400
FLFCD N+VCNYASRND+SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQ
Sbjct: 1588 FLFCDFNNVCNYASRNDKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQ 1647
Query: 401 TLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
T+ IP CP GWS LWIGYSF MHT L+SPGSCLE
Sbjct: 1648 TIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLE 1690
Score = 54.0 bits (124), Expect = 6e-08
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Frame = +2
Query: 68 HSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LN 241
HSQ +P C G LW GYS ++ + Q L GSC+ F PF+ C+
Sbjct: 1645 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGAR 1704
Query: 242 DVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVK------YISRCVVC 364
C+Y + N S+WL+T V ++ +K +SRC VC
Sbjct: 1705 GSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1750
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 262 bits (642), Expect = 1e-70
Identities = 112/163 (68%), Positives = 127/163 (77%)
Frame = +2
Query: 41 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 220
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1529 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1588
Query: 221 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQ 400
FLFCD N+VCNYASRND+SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQ
Sbjct: 1589 FLFCDFNNVCNYASRNDKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQ 1648
Query: 401 TLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
T+ IP CP GWS LWIGYSF MHT L+SPGSCLE
Sbjct: 1649 TIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLE 1691
Score = 54.0 bits (124), Expect = 6e-08
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Frame = +2
Query: 68 HSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LN 241
HSQ +P C G LW GYS ++ + Q L GSC+ F PF+ C+
Sbjct: 1646 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGAR 1705
Query: 242 DVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVK------YISRCVVC 364
C+Y + N S+WL+T V ++ +K +SRC VC
Sbjct: 1706 GSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1751
>J05066-1|AAA27989.1| 261|Caenorhabditis elegans alpha-2 (IV)
collagen protein.
Length = 261
Score = 260 bits (638), Expect = 3e-70
Identities = 111/163 (68%), Positives = 127/163 (77%)
Frame = +2
Query: 41 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 220
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 31 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 90
Query: 221 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQ 400
FLFCD N+VCNYASRN++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQ
Sbjct: 91 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQ 150
Query: 401 TLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
T+ IP CP GWS LWIGYSF MHT L+SPGSCLE
Sbjct: 151 TIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLE 193
Score = 54.0 bits (124), Expect = 6e-08
Identities = 34/107 (31%), Positives = 49/107 (45%), Gaps = 8/107 (7%)
Frame = +2
Query: 68 HSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LN 241
HSQ +P C G LW GYS ++ + Q L GSC+ F PF+ C+
Sbjct: 148 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSLSSPGSCLEDFRATPFIECNGAR 207
Query: 242 DVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVK------YISRCVVC 364
C+Y + N S+WL+T V ++ +K +SRC VC
Sbjct: 208 GSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 253
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 258 bits (631), Expect = 2e-69
Identities = 110/163 (67%), Positives = 126/163 (77%)
Frame = +2
Query: 41 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 220
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1529 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1588
Query: 221 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQ 400
FLFCD N+VCNYASRN++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQ
Sbjct: 1589 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQ 1648
Query: 401 TLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
T+ IP CP GWS LWIGYSF MHT +SPGSCLE
Sbjct: 1649 TIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLE 1691
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = +2
Query: 68 HSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LN 241
HSQ +P C G LW GYS ++ + Q GSC+ F PF+ C+
Sbjct: 1646 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGAR 1705
Query: 242 DVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVK------YISRCVVC 364
C+Y + N S+WL+T V ++ +K +SRC VC
Sbjct: 1706 GSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1751
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 258 bits (631), Expect = 2e-69
Identities = 110/163 (67%), Positives = 126/163 (77%)
Frame = +2
Query: 41 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 220
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1528 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1587
Query: 221 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQ 400
FLFCD N+VCNYASRN++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQ
Sbjct: 1588 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQ 1647
Query: 401 TLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
T+ IP CP GWS LWIGYSF MHT +SPGSCLE
Sbjct: 1648 TIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLE 1690
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = +2
Query: 68 HSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LN 241
HSQ +P C G LW GYS ++ + Q GSC+ F PF+ C+
Sbjct: 1645 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGAR 1704
Query: 242 DVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVK------YISRCVVC 364
C+Y + N S+WL+T V ++ +K +SRC VC
Sbjct: 1705 GSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1750
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) collagen
protein.
Length = 1795
Score = 258 bits (631), Expect = 2e-69
Identities = 110/163 (67%), Positives = 126/163 (77%)
Frame = +2
Query: 41 YLTGILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMP 220
Y G +LV+HSQ VP+C G KLWDGYSLLYI+GNEK+HNQDLG+AGSC+++FSTMP
Sbjct: 1565 YRDGFVLVKHSQTTEVPRCPEGQTKLWDGYSLLYIEGNEKSHNQDLGHAGSCLQRFSTMP 1624
Query: 221 FLFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVKYISRCVVCEVPSNVIAVHSQ 400
FLFCD N+VCNYASRN++SYWLST + IPMMPV EI YISRC VCE P+N IAVHSQ
Sbjct: 1625 FLFCDFNNVCNYASRNEKSYWLSTSEAIPMMPVNEREIEPYISRCAVCEAPANTIAVHSQ 1684
Query: 401 TLDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
T+ IP CP GWS LWIGYSF MHT +SPGSCLE
Sbjct: 1685 TIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLE 1727
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Frame = +2
Query: 68 HSQREVVPQCEPGHVKLWDGYSL-LYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFCD-LN 241
HSQ +P C G LW GYS ++ + Q GSC+ F PF+ C+
Sbjct: 1682 HSQTIQIPNCPAGWSSLWIGYSFAMHTGAGAEGGGQSPSSPGSCLEDFRATPFIECNGAR 1741
Query: 242 DVCNYASRNDRSYWLSTGQPIPMMPVEGNEIVK------YISRCVVC 364
C+Y + N S+WL+T V ++ +K +SRC VC
Sbjct: 1742 GSCHYFA-NKFSFWLTTIDNDSEFKVPESQTLKSGNLRTRVSRCQVC 1787
>Z27078-7|CAE52901.2| 1502|Caenorhabditis elegans Hypothetical protein
K04H4.1b protein.
Length = 1502
Score = 217 bits (529), Expect = 5e-57
Identities = 95/162 (58%), Positives = 114/162 (70%), Gaps = 2/162 (1%)
Frame = +2
Query: 50 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 229
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 1278 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 1337
Query: 230 CDLNDVCNYASRNDRSYWLSTGQPI-PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQT 403
C++N VC+ +SRND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ
Sbjct: 1338 CNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQD 1397
Query: 404 LDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
+P CP GWS +W GYSFVMHT L SPGSCLE
Sbjct: 1398 TSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 1439
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Frame = +2
Query: 56 LLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFC 232
++ HSQ VPQC G +W GYS +++ + Q L GSC+ +F +PF+ C
Sbjct: 1390 IIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIEC 1449
Query: 233 DLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNEIVKYISRCVVC 364
CNY + N +WLS PM ++ + +SRC VC
Sbjct: 1450 HGRGTCNYYATN-HGFWLSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVC 1498
>Z27078-6|CAA81584.4| 1759|Caenorhabditis elegans Hypothetical protein
K04H4.1a protein.
Length = 1759
Score = 217 bits (529), Expect = 5e-57
Identities = 95/162 (58%), Positives = 114/162 (70%), Gaps = 2/162 (1%)
Frame = +2
Query: 50 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 229
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 1535 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 1594
Query: 230 CDLNDVCNYASRNDRSYWLSTGQPI-PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQT 403
C++N VC+ +SRND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ
Sbjct: 1595 CNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQD 1654
Query: 404 LDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
+P CP GWS +W GYSFVMHT L SPGSCLE
Sbjct: 1655 TSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 1696
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/110 (31%), Positives = 52/110 (47%), Gaps = 7/110 (6%)
Frame = +2
Query: 56 LLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFC 232
++ HSQ VPQC G +W GYS +++ + Q L GSC+ +F +PF+ C
Sbjct: 1647 IIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIEC 1706
Query: 233 DLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNEIVKYISRCVVC 364
CNY + N +WLS PM ++ + +SRC VC
Sbjct: 1707 HGRGTCNYYATN-HGFWLSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVC 1755
>X56979-1|CAA40299.1| 1758|Caenorhabditis elegans alpha1(IV) collagen
protein.
Length = 1758
Score = 217 bits (529), Expect = 5e-57
Identities = 95/162 (58%), Positives = 114/162 (70%), Gaps = 2/162 (1%)
Frame = +2
Query: 50 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 229
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 1534 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 1593
Query: 230 CDLNDVCNYASRNDRSYWLSTGQPI-PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQT 403
C++N VC+ +SRND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ
Sbjct: 1594 CNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQD 1653
Query: 404 LDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
+P CP GWS +W GYSFVMHT L SPGSCLE
Sbjct: 1654 TSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 1695
Score = 57.2 bits (132), Expect = 7e-09
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Frame = +2
Query: 56 LLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFC 232
++ HSQ VPQC G +W GYS +++ + Q L GSC+ +F +PF+ C
Sbjct: 1646 IIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIEC 1705
Query: 233 DLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNEIVKYISRCVVC 364
CNY + N +W S PM ++ + +SRC VC
Sbjct: 1706 HGRGTCNYYATN-HGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVC 1754
>J05067-1|AAB59179.1| 313|Caenorhabditis elegans clb-2 protein.
Length = 313
Score = 217 bits (529), Expect = 5e-57
Identities = 95/162 (58%), Positives = 114/162 (70%), Gaps = 2/162 (1%)
Frame = +2
Query: 50 GILLVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLF 229
G +HSQ VPQC PG +LW+GYSLLY+ GN +A QDLG GSC+ KF+TMPF+F
Sbjct: 89 GFTFAKHSQTTAVPQCPPGASQLWEGYSLLYVQGNGRASGQDLGQPGSCLSKFNTMPFMF 148
Query: 230 CDLNDVCNYASRNDRSYWLSTGQPI-PMM-PVEGNEIVKYISRCVVCEVPSNVIAVHSQT 403
C++N VC+ +SRND S+WLST +P+ PMM PV G I YISRC VCEVP+ +IAVHSQ
Sbjct: 149 CNMNSVCHVSSRNDYSFWLSTDEPMTPMMNPVTGTAIRPYISRCAVCEVPTQIIAVHSQD 208
Query: 404 LDIPGCPVGWSELWIGYSFVMHTXXXXXXXXXXLASPGSCLE 529
+P CP GWS +W GYSFVMHT L SPGSCLE
Sbjct: 209 TSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLE 250
Score = 57.2 bits (132), Expect = 7e-09
Identities = 34/110 (30%), Positives = 51/110 (46%), Gaps = 7/110 (6%)
Frame = +2
Query: 56 LLVRHSQREVVPQCEPGHVKLWDGYS-LLYIDGNEKAHNQDLGYAGSCVRKFSTMPFLFC 232
++ HSQ VPQC G +W GYS +++ + Q L GSC+ +F +PF+ C
Sbjct: 201 IIAVHSQDTSVPQCPQGWSGMWTGYSFVMHTAAGAEGTGQSLQSPGSCLEEFRAVPFIEC 260
Query: 233 DLNDVCNYASRNDRSYWLSTGQP-----IPM-MPVEGNEIVKYISRCVVC 364
CNY + N +W S PM ++ + +SRC VC
Sbjct: 261 HGRGTCNYYATN-HGFWPSIVDQDKQFRKPMSQTLKAGGLKDRVSRCQVC 309
>Z68315-3|CAA92670.1| 430|Caenorhabditis elegans Hypothetical
protein F28C6.3 protein.
Length = 430
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 77 REVVPQCEPGHVKLWDGYSLLYIDGNEKAHN 169
R V + GHVK+WDG S ++ ++AH+
Sbjct: 272 RLYVTASKDGHVKIWDGVSNRCVETFKRAHD 302
>Z75711-2|CAB00033.2| 425|Caenorhabditis elegans Hypothetical
protein K02B12.3 protein.
Length = 425
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 167 NQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASRNDRSYWLSTGQ 298
NQD+G+ CV KF T +++ C + Y ++ GQ
Sbjct: 61 NQDVGFQSKCVGKFDTGSMATMNMDVACAF-DEISAKYVIAAGQ 103
>U64598-2|AAK39214.2| 558|Caenorhabditis elegans Hypothetical
protein C52B9.4 protein.
Length = 558
Score = 27.5 bits (58), Expect = 6.3
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Frame = +2
Query: 278 YWLSTG--QPIPMMPVEGNEIVKYISRCVVCEVPSNVIA-----VHSQTLDI-PGCPVGW 433
YW+ T I M+ ++ N+I + R + +VIA + S I P C V W
Sbjct: 368 YWIFTSLASTIRMLRLKRNDIKLNVYRHFANTLAFSVIASVIFMLWSMIYHIFPTCRVDW 427
Query: 434 SELWIGYSF 460
ELW+ +F
Sbjct: 428 KELWVDTAF 436
>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
protein Y66D12A.14 protein.
Length = 2870
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +2
Query: 224 LFCDLNDVCNYASRNDRSYWLSTGQPIPMMPVEGNEI--VKYISRCVVCEVPSNVIAVHS 397
LF L N + + +YW+ G+P+P ++ +K I E + IA H
Sbjct: 2350 LFPSLVQSFNISKIKNLAYWVVGGEPLPQSLLDSALALGIKVIQNYGPTETTAFAIAKHM 2409
Query: 398 QTLDIPGCPVG 430
+ D GC +G
Sbjct: 2410 KKGD-AGCQIG 2419
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,462,417
Number of Sequences: 27780
Number of extensions: 270712
Number of successful extensions: 596
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 572
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -