Samia BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M17
         (530 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g72760.1 68414.m08413 protein kinase family protein contains ...    30   0.85 
At1g47450.1 68414.m05260 expressed protein                             29   2.6  
At3g52490.1 68416.m05772 heat shock protein-related contains sim...    28   3.4  
At3g06520.1 68416.m00756 agenet domain-containing protein contai...    28   4.5  
At2g27570.1 68415.m03340 sulfotransferase family protein similar...    27   7.9  
At2g13680.1 68415.m01508 glycosyl transferase family 48 protein ...    27   7.9  
At1g60380.1 68414.m06798 apical meristem formation protein-relat...    27   7.9  

>At1g72760.1 68414.m08413 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 697

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
 Frame = +2

Query: 89  PQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYAGSCVRK-FSTMPFLFCDL---NDVCNY 256
           PQC   HV+L D     + D  ++AH   L + G C RK       +  D+   N + NY
Sbjct: 43  PQCVLIHVQLGDTGGHFHQDNPDEAHEFFLPFRGFCARKGIIAKEVILHDIDISNAIVNY 102

Query: 257 ASRN 268
            + N
Sbjct: 103 ITNN 106


>At1g47450.1 68414.m05260 expressed protein
          Length = 169

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
 Frame = +2

Query: 59  LVRHSQREVVPQCEPGHVKLWDGYSLLYIDGNEKAHNQDLGYA----GSCVRK 205
           ++    RE++   +  H +L +G+S +Y+ GN  A ++D+ Y+      CVR+
Sbjct: 105 IINECCREILKMGKDCHFRLVEGWSAMYVYGNSIA-SKDIPYSKQSWNECVRR 156


>At3g52490.1 68416.m05772 heat shock protein-related contains
           similarity to 101 kDa heat shock protein; HSP101
           [Triticum aestivum] gi|11561808|gb|AAC83689
          Length = 815

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = -3

Query: 426 TGQPGMSNVWLWTAITLDGTSHTTHLEM 343
           +GQP + ++W  T +T+  TS++  L +
Sbjct: 349 SGQPSLESLWCLTTLTIPATSNSLRLSL 376


>At3g06520.1 68416.m00756 agenet domain-containing protein contains
           Pfam PF05641: Agenet domain
          Length = 466

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -3

Query: 237 RSQKRNGIVLNFRTHEPAYPRSWLCA 160
           R Q   G ++  R+ E AY  SW CA
Sbjct: 166 RDQYEKGALVEVRSEEKAYKGSWYCA 191


>At2g27570.1 68415.m03340 sulfotransferase family protein similar to
           steroid sulfotransferase from [Brassica napus]
           GI:3420008, GI:3420006; contains Pfam profile PF00685:
           Sulfotransferase domain
          Length = 273

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -3

Query: 249 QTSLRSQKRNGIVLNFRTHEPAYPRSWLCAFSFPSIYNSE*PSHNFTCP 103
           Q + + Q  N IV +F    P    +WL A +F  ++ S+ PSH+   P
Sbjct: 57  QKNFKPQDTNIIVASF----PKCGTTWLKALTFSLVHRSKHPSHDHHHP 101


>At2g13680.1 68415.m01508 glycosyl transferase family 48 protein
           contains Pfam profile: PF02364 1,3-beta-glucan synthase
          Length = 1923

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +2

Query: 155 EKAHNQDLGYAGSCVRKFSTMPFLFCDLNDVCNYASR 265
           EKAH  D    G  VR+F T+ F   + ++  + ASR
Sbjct: 71  EKAHRLDPSSGGRGVRQFKTLLFQRLERDNASSLASR 107


>At1g60380.1 68414.m06798 apical meristem formation protein-related
           contains similarity to CUC1 [Arabidopsis thaliana]
           gi|12060422|dbj|BAB20598 and NAM [Petunia x hybrida]
           gi|1279640|emb|CAA63101
          Length = 318

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 299 PIPMMPVEGNEIVKYISRCVVCEVPSNVIAVH 394
           P+ +M  EG +   Y++  V C  PS ++ VH
Sbjct: 183 PVTIMISEGKDWPSYVTNNVYCLHPSELVNVH 214


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,548,321
Number of Sequences: 28952
Number of extensions: 237554
Number of successful extensions: 501
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 987020800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)