Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M15
         (612 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_56972| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   1.3  
SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24)                29   2.2  
SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)                     29   3.9  
SB_40116| Best HMM Match : EGF (HMM E-Value=0)                         29   3.9  
SB_28895| Best HMM Match : p450 (HMM E-Value=0)                        29   3.9  
SB_17270| Best HMM Match : ABC_tran (HMM E-Value=5.1e-08)              29   3.9  
SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.)               29   3.9  
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   3.9  
SB_48230| Best HMM Match : DUF152 (HMM E-Value=1.5)                    29   3.9  
SB_29415| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   5.2  
SB_6099| Best HMM Match : UPAR_LY6 (HMM E-Value=0.17)                  28   6.9  
SB_24664| Best HMM Match : UPAR_LY6 (HMM E-Value=0.17)                 28   6.9  
SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)                     28   6.9  
SB_1610| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.9  
SB_45995| Best HMM Match : Cna_B (HMM E-Value=4.2)                     27   9.1  

>SB_56972| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 868

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 269 ISVVLLLCIIIGT-VRCVMSRHNIEQPKGPDVSATTDIPNGFNDSISEVDNDKHYKPI 439
           I + L  C I G+ V+C+ S   +E  + PD + TT +PN +   +S+  N +  K +
Sbjct: 292 IRLELYGCAIPGSEVKCI-SPLGMESGQIPDEALTTSVPNDYQGGVSKAANGRLNKVV 348


>SB_58624| Best HMM Match : E-MAP-115 (HMM E-Value=0.24)
          Length = 298

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 5   SAPEEDEVAHDVSDLEHDDVDESNDR 82
           S PEED   H   DL+HDD D+ + R
Sbjct: 258 SQPEEDR-RHSADDLDHDDDDDDHRR 282


>SB_59712| Best HMM Match : SAP (HMM E-Value=3e-13)
          Length = 1072

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = -2

Query: 605 RHFYWVLSHLAVHIGTDVWICIRHWATGVPIDF--RAHSNV-REHFLFKTRVYG 453
           RHFYW LS  AV     V   +  W   +P+D+  R  S+V + H  F  + YG
Sbjct: 38  RHFYWSLSANAV-----VRNLVELWNCKIPLDYVSRRSSHVYKRHKRFMGKYYG 86


>SB_40116| Best HMM Match : EGF (HMM E-Value=0)
          Length = 340

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 274 CGVTTVYHHWYC 309
           CGV++VY HW+C
Sbjct: 225 CGVSSVYGHWFC 236


>SB_28895| Best HMM Match : p450 (HMM E-Value=0)
          Length = 492

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -1

Query: 423 LSLSTSDMLSLKPFGMSVVADTSGPLGCSIL 331
           L+ +  D++ ++ FGM +V  TSGPL   +L
Sbjct: 57  LAKTHGDIMMIELFGMKIVVVTSGPLAREVL 87


>SB_17270| Best HMM Match : ABC_tran (HMM E-Value=5.1e-08)
          Length = 771

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = -3

Query: 565 LVLTCGYVLGTGRPAYLLIFGLTATFENISCLRPESTESTGPD 437
           +VL CG VLG  RP+  L   + + +   S      T S+ PD
Sbjct: 8   MVLFCGVVLGCTRPSSALTREMCSAYNVSSANSSTPTNSSSPD 50


>SB_2270| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 542

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/40 (32%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
 Frame = +2

Query: 269 ISVVLLLCIIIGTVRCV-MSRHNIEQPKGPDVSATTDIPN 385
           ++VVL+  +++GT + + +   N +  K P ++ATT +PN
Sbjct: 195 VAVVLMQLLVLGTTKHLQVHERNAKVHKEPTLAATTLVPN 234


>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 7645

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = +1

Query: 274  CGVTTVYHHWYC 309
            CGV++VY HW+C
Sbjct: 7269 CGVSSVYGHWFC 7280


>SB_48230| Best HMM Match : DUF152 (HMM E-Value=1.5)
          Length = 579

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +2

Query: 5   SAPEEDEVAHDVSDLEHDDVDESNDR 82
           S PEED   H   DL+HDD D+   R
Sbjct: 107 SQPEEDR-RHSADDLDHDDDDDHRRR 131


>SB_29415| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 483

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
 Frame = +3

Query: 489 NVAVSPKINRYAGRPVPN--TYPHVSTNMYGQVAEYPIEMPLR 611
           N    P++ R   R + N  T+PH+   +  ++  YP   PLR
Sbjct: 418 NYPTPPRLRRELVRRIVNYPTHPHLRRELVRRIVNYPTPPPLR 460


>SB_6099| Best HMM Match : UPAR_LY6 (HMM E-Value=0.17)
          Length = 230

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 553 CGYVLGTGRPAYLLIFGLTATF 488
           C  V  TG PAY ++FG+ A F
Sbjct: 102 CNGVTTTGIPAYAILFGVAAVF 123


>SB_24664| Best HMM Match : UPAR_LY6 (HMM E-Value=0.17)
          Length = 127

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 553 CGYVLGTGRPAYLLIFGLTATF 488
           C  V  TG PAY ++FG+ A F
Sbjct: 102 CNGVTTTGIPAYAILFGVAAVF 123


>SB_3575| Best HMM Match : DUF943 (HMM E-Value=4.5)
          Length = 612

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/28 (42%), Positives = 13/28 (46%)
 Frame = +1

Query: 295 HHWYCSLCHEQA*Y*TAQRSRRICNYRH 378
           HH YC  CH +  Y    R    C YRH
Sbjct: 19  HHHYCCYCHHRYCY---YRHHHYCWYRH 43


>SB_1610| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 519

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 19/60 (31%), Positives = 28/60 (46%)
 Frame = +2

Query: 251 VYIIAGISVVLLLCIIIGTVRCVMSRHNIEQPKGPDVSATTDIPNGFNDSISEVDNDKHY 430
           VY + G +V  L+C +IG + CV    +    +  +     DI N  ND    VDND  +
Sbjct: 400 VYRLIG-TVNGLICTVIGLIGCVYGLTDSRGDERDEKDDKEDIKNDIND---VVDNDVEF 455


>SB_45995| Best HMM Match : Cna_B (HMM E-Value=4.2)
          Length = 171

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 14  EEDEVAHDVSDLEHDDVDESND 79
           ++D ++HDV DL +DD D S D
Sbjct: 39  DDDGLSHDVDDLYYDDNDLSYD 60


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,601,724
Number of Sequences: 59808
Number of extensions: 385991
Number of successful extensions: 1289
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1499981500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)