Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M15
         (612 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4071|AAF56668.1|  554|Drosophila melanogaster CG5815-PB...    30   2.8  
AE014297-4070|AAN14396.1|  581|Drosophila melanogaster CG5815-PA...    30   2.8  
AE014296-1865|AAF50122.1|   96|Drosophila melanogaster CG14148-P...    29   6.5  

>AE014297-4071|AAF56668.1|  554|Drosophila melanogaster CG5815-PB,
           isoform B protein.
          Length = 554

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = +3

Query: 339 NSPKVPTYLQLPTSRMASTTAYPKSTTINITSLSGPVDSVDSGLKQEMFSNVAVSP---- 506
           +S K PT  Q PT   AS+T+   S + +  S S    S  +    ++ +    +     
Sbjct: 339 DSFKKPTAPQ-PTKSSASSTSLSSSNSHSSASRSSVSSSRPATKSAQLTARPGATASAVG 397

Query: 507 KINRYAGRPVPNTYPHVSTNMYGQVAEYP 593
           K +  + R VP+  P+ +T++ G V E+P
Sbjct: 398 KPSSSSSRDVPSKNPYAATSLKGTVREFP 426


>AE014297-4070|AAN14396.1|  581|Drosophila melanogaster CG5815-PA,
           isoform A protein.
          Length = 581

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = +3

Query: 339 NSPKVPTYLQLPTSRMASTTAYPKSTTINITSLSGPVDSVDSGLKQEMFSNVAVSP---- 506
           +S K PT  Q PT   AS+T+   S + +  S S    S  +    ++ +    +     
Sbjct: 339 DSFKKPTAPQ-PTKSSASSTSLSSSNSHSSASRSSVSSSRPATKSAQLTARPGATASAVG 397

Query: 507 KINRYAGRPVPNTYPHVSTNMYGQVAEYP 593
           K +  + R VP+  P+ +T++ G V E+P
Sbjct: 398 KPSSSSSRDVPSKNPYAATSLKGTVREFP 426


>AE014296-1865|AAF50122.1|   96|Drosophila melanogaster CG14148-PA
           protein.
          Length = 96

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 545 CIRHWATGVPIDFRAHSNVREHFLFKTRV 459
           C R W +  P+  R HS V EH L   R+
Sbjct: 51  CNRRWKSQEPLRLRGHSPVEEHPLLAKRM 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,216,381
Number of Sequences: 53049
Number of extensions: 559325
Number of successful extensions: 1745
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1741
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2497240350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)