Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M15
         (612 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   1.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   5.4  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   7.2  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   9.5  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   9.5  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 14/36 (38%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = +3

Query: 339 NSP-KVPTYLQLPTSRMASTTAYPKSTTINITSLSG 443
           NSP   P YL    +   ST+  P S+T     LSG
Sbjct: 821 NSPASSPRYLSAAATSSTSTSPRPASSTAATLVLSG 856


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
 Frame = +2

Query: 239 DMKYVYIIAGISV---VLLLCIIIGTVRCVMSRHNIEQPKGPDVSATTDIPNG 388
           D   V IIAG  V   VLL+ III TV  +    +    K P    T +  NG
Sbjct: 527 DNMQVRIIAGAIVAVVVLLVIIIIMTVLILRRASDECNKKQPSDCDTLEYRNG 579


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +3

Query: 405 PKSTTINITSLSGPVDSVDSGLKQE 479
           P STT+N +  SG + S   G+K E
Sbjct: 279 PNSTTMNGSPGSGGIRSDQMGVKIE 303


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/19 (36%), Positives = 8/19 (42%)
 Frame = -3

Query: 133 WNSGHSWSRRHC*FNPPPV 77
           W    SW   H  F P P+
Sbjct: 222 WEQNRSWRITHSYFMPDPL 240


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 23  EVAHDVSDLEHDDV 64
           E+  +V D+E+DD+
Sbjct: 291 EIKKEVEDMEYDDI 304


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,425
Number of Sequences: 438
Number of extensions: 3723
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)