Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M10
         (321 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   0.60 
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    23   0.60 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    23   0.79 
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   0.79 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   0.79 
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   1.0  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   1.0  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   1.8  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   3.2  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.4 bits (48), Expect = 0.60
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 78  VICSVKEPAPECLQPIDKGTCRAEF 152
           V C  +   P C +  DK TC   F
Sbjct: 874 VTCKCENGKPTCWRECDKATCEKLF 898


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 23.4 bits (48), Expect = 0.60
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
 Frame = +3

Query: 66  IVHTVICSVKEPAPECLQ--PIDKGTCRAEFPSYGY 167
           I  ++  ++    P  LQ  P+D+  C  E  S+GY
Sbjct: 155 ITRSIRLTITASCPMNLQYLPMDRQLCHIEIESFGY 190


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.0 bits (47), Expect = 0.79
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 231 IDWSYPCSR 205
           +DW YPC R
Sbjct: 140 LDWEYPCQR 148


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 0.79
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 231 IDWSYPCSR 205
           +DW YPC R
Sbjct: 141 LDWEYPCQR 149


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 0.79
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = -1

Query: 231 IDWSYPCSR 205
           +DW YPC R
Sbjct: 141 LDWEYPCQR 149


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 75  TVICSVKEPAPECLQPIDK 131
           TVIC++ +P+ E     DK
Sbjct: 271 TVICTIHQPSSEVYSMFDK 289


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 75  TVICSVKEPAPECLQPIDK 131
           TVIC++ +P+ E     DK
Sbjct: 271 TVICTIHQPSSEVYSMFDK 289


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 141 RAEFPSYGYNSSTKTCELFYYGGCKGN 221
           R+   S+G   +T    LF YGG  GN
Sbjct: 365 RSLLTSFGGALTTFLVILFQYGGIHGN 391


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 3.2
 Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +3

Query: 66  IVHTVICSVKEP-APECLQPIDKGTCRAEFPSYGYNSSTKTC 188
           +V  V+ +   P A +C++     TCR  F    Y++ +K C
Sbjct: 32  LVEYVLLNEDNPCARKCVKDSVPMTCRYTFLLEWYHTLSKAC 73


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,965
Number of Sequences: 336
Number of extensions: 1389
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6048897
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)