Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_M10
(321 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 1e-12
SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 2e-10
SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-09
SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34) 56 5e-09
SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 56 6e-09
SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28) 55 1e-08
SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 54 3e-08
SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 6e-07
SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 6e-05
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-04
SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.002
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.090
SB_5204| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.014) 27 3.4
SB_44391| Best HMM Match : DUF1070 (HMM E-Value=2.7) 27 4.5
SB_35167| Best HMM Match : zf-HIT (HMM E-Value=0.046) 27 4.5
SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.5
SB_30265| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.9
SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.9
SB_51055| Best HMM Match : Neur_chan_LBD (HMM E-Value=0) 26 7.9
SB_151| Best HMM Match : zf-CCHC (HMM E-Value=8.9e-05) 26 7.9
>SB_24641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1120
Score = 68.1 bits (159), Expect = 1e-12
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +3
Query: 93 KEPAPECLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEAC 263
K + ECLQP G CRA F + YN +++ C+ F YGGC+GNSN F+++ CE+ C
Sbjct: 219 KNLSEECLQPKLTGPCRAYFERWFYNQTSRKCKQFVYGGCQGNSNNFESKAECEKKC 275
>SB_6080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2101
Score = 61.3 bits (142), Expect = 2e-10
Identities = 26/60 (43%), Positives = 35/60 (58%)
Frame = +3
Query: 84 CSVKEPAPECLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEAC 263
CS KE C P + G+C P Y +NS++ CE F+Y GC+GN+NRF T C+ C
Sbjct: 676 CSAKEI---CDLPAEAGSCDGHMPLYFHNSTSGLCEKFHYSGCEGNANRFPTMRKCQRKC 732
Score = 53.2 bits (122), Expect = 5e-08
Identities = 20/52 (38%), Positives = 32/52 (61%)
Frame = +3
Query: 111 CLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEACN 266
C P G C A F + Y+ + C++F YGGC+GN+N F+++ AC + C+
Sbjct: 626 CSLPKLTGPCMARFIRWHYDMRSSECKMFTYGGCQGNANNFESKAACLKKCS 677
Score = 47.2 bits (107), Expect = 3e-06
Identities = 23/55 (41%), Positives = 29/55 (52%)
Frame = +3
Query: 99 PAPECLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEAC 263
P CLQP GT A + YN++ + CE F Y G GN N F + AC+ AC
Sbjct: 201 PRSVCLQPSLIGTGFAFKVHFFYNAAKRLCEPFVYSGMGGNKNNFKDKDACQRAC 255
>SB_53796| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 58.4 bits (135), Expect = 1e-09
Identities = 24/51 (47%), Positives = 27/51 (52%)
Frame = +3
Query: 111 CLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEAC 263
C P G CRA P + YN C F YGGC GN N FDT+ C+ AC
Sbjct: 25 CKMPAAAGPCRAAMPQWYYNFKRHRCIRFIYGGCGGNPNNFDTKNECKSAC 75
>SB_42994| Best HMM Match : NHL (HMM E-Value=8.4e-34)
Length = 750
Score = 56.4 bits (130), Expect = 5e-09
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +3
Query: 75 TVICSVKEPAPECLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACE 254
T+ S ++P C+ G CR FP + Y+++ C F YGGC GN+N+FD++ C
Sbjct: 493 TLTSSEQDP---CVLENATGPCRGAFPKWYYSTADNACHEFLYGGCGGNANKFDSKSECL 549
Query: 255 EAC 263
E C
Sbjct: 550 EVC 552
>SB_57724| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 3804
Score = 56.0 bits (129), Expect = 6e-09
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +3
Query: 111 CLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEAC 263
C P+ G CRA + YN T C+ F YGGC GN NRF ++ C+ C
Sbjct: 2122 CSLPLRPGRCRARMVMWFYNKRTGRCQTFNYGGCGGNGNRFRSRRQCQRRC 2172
>SB_4642| Best HMM Match : Kunitz_BPTI (HMM E-Value=6.2e-28)
Length = 65
Score = 54.8 bits (126), Expect = 1e-08
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +3
Query: 111 CLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEACNV 269
C +D G C+A P + + K C+ F YGGC GN NRF T+ C+ C +
Sbjct: 12 CGLKVDPGPCKAYMPRFYFEIEKKECQEFIYGGCGGNENRFFTKRECQRICKL 64
>SB_22840| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 4002
Score = 54.0 bits (124), Expect = 3e-08
Identities = 24/51 (47%), Positives = 27/51 (52%)
Frame = +3
Query: 111 CLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEAC 263
C P+ G CRA + YN C F YGGC GN NRF T+ ACE C
Sbjct: 2054 CNLPMSVGRCRALMWMWYYNKKKGRCIRFAYGGCGGNPNRFKTKKACERRC 2104
>SB_21308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2641
Score = 49.6 bits (113), Expect = 6e-07
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +3
Query: 72 HTVICSVKEPAPE--CLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQL 245
HT ++PA + C + C + P + +NS T C+ Y GC GN N FDT
Sbjct: 2358 HTGANCQEDPATDSVCERMWQSPKCTSHLPKFSFNSQTGQCQQLAYNGCLGNLNNFDTAE 2417
Query: 246 ACEEAC 263
C+ C
Sbjct: 2418 ECQNTC 2423
>SB_44878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1338
Score = 42.7 bits (96), Expect = 6e-05
Identities = 20/58 (34%), Positives = 26/58 (44%)
Frame = +3
Query: 75 TVICSVKEPAPECLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLA 248
T C+ K C P G C A + YN+ C+ F +GGC N N F T+ A
Sbjct: 1222 TCQCAQKRIKSVCKLPKFAGPCMASIERFYYNAKIGKCQSFVFGGCLPNGNNFKTRKA 1279
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 40.7 bits (91), Expect = 3e-04
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 111 CLQPIDKGTCRAE--FPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEAC 263
C D GTC + + ++ + C+ F Y GC GN+NRF T+ CE C
Sbjct: 211 CTNQPDYGTCGFKNFVVRWYFDKAAGICKPFVYSGCGGNTNRFVTKRKCEAFC 263
>SB_7591| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3261
Score = 37.5 bits (83), Expect = 0.002
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +3
Query: 111 CLQPIDKGTCRAEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEAC 263
CL G+C + Y+++ C F Y GC GN N F + C E C
Sbjct: 3156 CLLRSRTGSCSRFTVRWFYDTNRGKCAPFVYTGCGGNENNFMNEQKCLETC 3206
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 32.3 bits (70), Expect = 0.090
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 144 AEFPSYGYNSSTKTCELFYYGGCKGNSNRFDTQLACEEAC 263
+E +Y Y+ +++ C+ + GC GN N F T +C + C
Sbjct: 580 SEMRAY-YDVTSRQCKQTEFWGCNGNHNLFSTVDSCSKTC 618
>SB_5204| Best HMM Match : Peptidase_A16_N (HMM E-Value=0.014)
Length = 351
Score = 27.1 bits (57), Expect = 3.4
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 4/37 (10%)
Frame = +1
Query: 160 TDIIVQRKRANCSITAAAR----VTPIDSTLNLRVRK 258
TDI +RKR C IT A + +T D+T R RK
Sbjct: 3 TDIRTRRKRLRCKITRAIKRIRNLTTTDTTTAKRFRK 39
>SB_44391| Best HMM Match : DUF1070 (HMM E-Value=2.7)
Length = 295
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 175 QRKRANCSITAAARVTPIDSTLNLRVRKP 261
+R C + AARVTPI ++ R RKP
Sbjct: 253 RRNGKRCGLGGAARVTPI--SMRARARKP 279
>SB_35167| Best HMM Match : zf-HIT (HMM E-Value=0.046)
Length = 632
Score = 26.6 bits (56), Expect = 4.5
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 84 CSVKEPAPECLQPIDKGTCRAEFPSYGYNSSTKTCELFYYG-GC 212
C + EC+Q TC+++ + Y S K + +Y GC
Sbjct: 533 CKLNSTYHECIQKKTLQTCKSDLANICYTKSVKRDNIVHYEMGC 576
>SB_3882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 26.6 bits (56), Expect = 4.5
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +1
Query: 127 TKVPAEQSSQVTDIIVQRKRANCSITAAARVTPIDSTLNLRVRKP 261
T A QSS + ++V KRA ++++ + + P + R R+P
Sbjct: 59 TSFEAAQSSSMISVLVPSKRAETNLSSMS-IRPASGAMTNRRRRP 102
>SB_30265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 589
Score = 26.2 bits (55), Expect = 5.9
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 168 NSSTKTCELFYYGGCKGNSNRFDTQLACE 254
N + +T L G KG+SNR D CE
Sbjct: 315 NEAKETARLVRDGAEKGSSNRHDADSECE 343
>SB_48269| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1720
Score = 26.2 bits (55), Expect = 5.9
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 72 HTVICSVKEPAPECLQP 122
H+ +C++ EP P C P
Sbjct: 231 HSFVCNIMEPYPNCCSP 247
>SB_51055| Best HMM Match : Neur_chan_LBD (HMM E-Value=0)
Length = 456
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 120 PIDKGTCRAEFPSYGYNSS 176
P+DK C F SYGY ++
Sbjct: 184 PMDKQNCGISFASYGYTTA 202
>SB_151| Best HMM Match : zf-CCHC (HMM E-Value=8.9e-05)
Length = 1382
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = +1
Query: 127 TKVPAEQSSQVTDIIVQRKRANCSITAAAR----VTPIDSTLNLRVRK 258
T + + TDI +RK+ C IT A + +T D+T R RK
Sbjct: 742 TSASSTGTDSETDIRTRRKQLRCKITRAIKRIRDLTTTDTTTAKRFRK 789
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,441,022
Number of Sequences: 59808
Number of extensions: 177012
Number of successful extensions: 488
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 425519554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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