Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_M09
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           24   0.93 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   1.6  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   2.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.7  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 134 GWKLTPQPT*GCSSP 90
           GW++TP P+ G +SP
Sbjct: 66  GWQVTPLPSDGTTSP 80


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 14/53 (26%), Positives = 22/53 (41%)
 Frame = -1

Query: 364 PDAVRPRACRCPVSSGSKTLQRQINRTGSMCLVWKIPTDPRPLIVYGRDVTLR 206
           PD+ R    +   S   K L+ +   +GS+   W   T      +YG  V +R
Sbjct: 201 PDSARKPFFKLLTSKIYKVLEEKYKTSGSLYTCWSEFTQKTQGQIYGIKVDIR 253


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -1

Query: 367 CPDAVRPRACRCPVSSGSKTLQRQINR 287
           C D  +   CRCP      TL +  NR
Sbjct: 159 CQDLGKTFMCRCPPDWEGTTLSQSPNR 185


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/33 (24%), Positives = 12/33 (36%)
 Frame = -2

Query: 480 NDVGIPVPAEMRQSVFSMNIMGHQDLVRFTLVH 382
           N V  P P  +   ++   + GH       L H
Sbjct: 308 NSVATPTPTSVMTELYPSPVPGHSTSPNLPLTH 340


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 579 LTFSEHLLYTLIFLFF 626
           + F+ HLL+   F+FF
Sbjct: 174 IIFTMHLLFCCAFIFF 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,136
Number of Sequences: 336
Number of extensions: 3441
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)