Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_M07
(590 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 59 2e-09
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 9e-09
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 8e-07
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 47 1e-05
SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.13
SB_605| Best HMM Match : Calx-beta (HMM E-Value=0) 31 0.70
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 29 3.8
SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38) 28 6.6
SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 6.6
SB_3622| Best HMM Match : K167R (HMM E-Value=1.5) 28 6.6
SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3) 28 6.6
SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 8.7
SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.7
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 27 8.7
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 59.3 bits (137), Expect = 2e-09
Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 7/157 (4%)
Frame = +1
Query: 94 REGFTALVREMKQALNV------KPNMQLVISVLPN-VNSSIYFDVPSIINLVDIVNIQA 252
++ FT L +E+ A + +P + L +V ++V I ++D++N+ A
Sbjct: 265 KQRFTILCQELLDAFKLEAAQTNRPRLLLTAAVAAGKATIDKAYEVDKIGQILDLINLMA 324
Query: 253 FDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWK 432
+D P+ +TA + P + A YWI GAP K+ LG+ T GR +K
Sbjct: 325 YDL-RGMWEPETGHHTA-LEGPPGEE--LTVSFAAQYWIDKGAPASKIALGLGTYGRAFK 380
Query: 433 LDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEIC 543
L +D G+ A+ G YT+ G L+Y EIC
Sbjct: 381 L-ADQTRHGL-KAPANGNPTRGQYTREPGFLAYYEIC 415
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 57.2 bits (132), Expect = 9e-09
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Frame = +1
Query: 82 ESEHREGFTALVREMKQALNV------KPNMQLVISVLPNVNS-SIYFDVPSIINLVDIV 240
E +HR FT L +E+ A KP + L +V + +++ ++ +D +
Sbjct: 150 EDKHR--FTLLCQELLAAFETEAANTGKPRLLLTAAVSAGETTVKNGYEISALGQALDWI 207
Query: 241 NIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTG 420
N+ ++D + + + A + + DPL A++ WI G P++K+ LGI G
Sbjct: 208 NLMSYDLHGDWEDT--TGHHAAMDSSTG-DPL-TVTHAVDLWIAGGMPSNKIALGIPLYG 263
Query: 421 RTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEIC 543
R++ L + ++ P A KGG+ GPYTK G ++Y EIC
Sbjct: 264 RSFTLKTANKTLDAP---ATKGGQ-GPYTKEAGYIAYFEIC 300
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 50.8 bits (116), Expect = 8e-07
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 7/156 (4%)
Frame = +1
Query: 58 GTTPVDDKESEHREGFTALVREM------KQALNVKPNMQLVISVLPNVNS-SIYFDVPS 216
G +P DK+ FT L EM K A KP M L +V + ++V
Sbjct: 527 GNSPPQDKQH-----FTILCEEMLDAFKRKAADTDKPRMLLTAAVSAGHGTVDAAYEVHK 581
Query: 217 IINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGAPTHKL 396
+ ++D +N+ +D + P P +TA + P ++ A+ YW++ G P K+
Sbjct: 582 LAGILDWINLMTYDLHGPWE-PYTGHHTALVGPPGDK---LTVSYAVKYWMEKGMPCGKI 637
Query: 397 VLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPY 504
LG++ G ++L ++ + P + +K G + PY
Sbjct: 638 ALGMANYGHAFELSDPTKTALGAPANVNK-GRSYPY 672
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 47.2 bits (107), Expect = 1e-05
Identities = 42/136 (30%), Positives = 62/136 (45%), Gaps = 11/136 (8%)
Frame = +1
Query: 202 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYW----- 366
+D+ I +D +N+ +D + PK +TA P D L AI YW
Sbjct: 584 YDIEGISKPLDWINVMTYDLHGTWE-PKTGHHTA--MGPDG-DKL-TLPFAIWYWMNNRD 638
Query: 367 ------IQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLS 528
I+NG P +K+VLG+ T GR + L+S + G +AG YT +G L+
Sbjct: 639 TWEKPGIRNGMPANKIVLGLGTYGRAFGLES----------AGNNGLDAGKYTGAKGFLA 688
Query: 529 YPEICAKLINPNQNGK 576
Y EIC + +N K
Sbjct: 689 YFEICKMGLTVVENNK 704
>SB_49700| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 7645
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +1
Query: 70 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSI 219
+DDK++E +E FT V + + PN ++VI++L N + SI F V S+
Sbjct: 703 LDDKKNEPQETFTVTVSSADSNIEISPN-EVVITILDN-DVSIGFMVTSV 750
Score = 29.5 bits (63), Expect = 2.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 70 VDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSI 219
+DDKE E E FT + + +NVKP + + N ++SI F++ ++
Sbjct: 2157 IDDKEIEDLEAFTVTLSSDDKRVNVKPETG-TVKITDN-DASIGFELATV 2204
>SB_605| Best HMM Match : Calx-beta (HMM E-Value=0)
Length = 1958
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = +1
Query: 49 KTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSI 219
K F +DD E+ E F + + V P++ V V+ + ++ I FDVPSI
Sbjct: 950 KDFVIALIDDDVVENPEKFAVVFSTDDPRVTVDPSIPFVTVVITDNDAMIGFDVPSI 1006
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +1
Query: 496 GPYTKVQGLLSYPEIC 543
GPYT+ G LSY EIC
Sbjct: 16 GPYTRESGFLSYYEIC 31
>SB_49662| Best HMM Match : Bromodomain (HMM E-Value=9.8e-38)
Length = 1301
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 67 PVDDKESEHREGFTALVREM 126
P DDK +E R FT+L++EM
Sbjct: 1066 PEDDKPAEQRMSFTSLLKEM 1085
>SB_26886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6489
Score = 27.9 bits (59), Expect = 6.6
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 43 IKKTFGTTPVDDKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVNSSIY 201
+KK F + V EH+ GF + A + K +++LV S P + +SIY
Sbjct: 306 LKKPFKQSEVVKNTKEHQNGFPFVAATTSGAAHWKTSVELVNS--PALGTSIY 356
>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 628
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +3
Query: 366 DSKWCAYPQTCPWYQHHWTYVEA 434
D + C+YP T PW WT + +
Sbjct: 80 DERNCSYPTTGPWTTRPWTPISS 102
>SB_3622| Best HMM Match : K167R (HMM E-Value=1.5)
Length = 441
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = -3
Query: 300 SVVRLFGVTFRCII--VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 127
SV F T + +I + C DV+ V + + V VNG QNA+ + + F + F
Sbjct: 252 SVENRFSGTNKALIDAIVCQDVEEVKSILETEAVNVNG-----QNAEGFVPLEFAVMLGF 306
Query: 126 HLTYKSGEAF 97
H K +AF
Sbjct: 307 HHIAKMLQAF 316
>SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3)
Length = 430
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 309 LRTAEPRSSTKRRRCYKLLD-SKWCAYPQTCPWYQHHWTYVEAR 437
LR + PRS ++ + K+ ++P P +HHWT E R
Sbjct: 26 LRNSTPRSKARKPLQFTSPSHGKFKSFPVKSPVRRHHWTLEEER 69
>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 915
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 412 TTGRTWKLDSDSEISGVPPIHADKGGEAGPYT-KVQGLLSYPEI 540
T G+TW E G+P + A GG A P + + +LS +I
Sbjct: 119 TAGKTWNASCFCEGRGMPLVGAVIGGAASPISLNIANVLSVNDI 162
>SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 27.5 bits (58), Expect = 8.7
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Frame = +1
Query: 202 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 381
+D+ +I+++VD + I A+D + KE P A N P + +++
Sbjct: 171 YDLKAIVDIVDFMVIMAYD---QQSQIKE----GPCIAKAN-SPYSQTLEGVQQYLKLNI 222
Query: 382 PTHKLVLGISTTGRTW---KLDSDSEISGVPPIH------ADKGGEAGPYTKVQGLL 525
+KLVLG+ G + ++D ++I + + +D G PY V LL
Sbjct: 223 SNNKLVLGLPWYGYDYPCEEIDEKNDICFIKKVPFRGVNCSDAAGTQIPYATVNDLL 279
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 339 KRRRCYKLLDSKWCAYPQTCP 401
K RCY L DSK C P P
Sbjct: 327 KAPRCYNLCDSKTCIIPTKAP 347
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.134 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,259,642
Number of Sequences: 59808
Number of extensions: 418634
Number of successful extensions: 894
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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