Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_M03
(615 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_1152 + 9170628-9171899 49 3e-06
01_06_0824 - 32243495-32244319,32244449-32244859 48 4e-06
11_01_0750 - 6315126-6315896,6316371-6316784 43 2e-04
11_02_0012 - 7346282-7347136,7347234-7347593 38 0.006
11_02_0011 - 7337618-7338496,7338596-7338991 38 0.008
11_01_0771 + 6453130-6454488 33 0.14
11_02_0014 - 7352619-7352918,7353173-7353418 33 0.18
11_01_0767 + 6438648-6438809,6439146-6440000 33 0.18
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 31 0.96
05_07_0209 + 28420008-28421510 30 1.7
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 30 1.7
02_02_0392 - 9649858-9650405,9650499-9650670,9650788-9650926,965... 29 2.2
10_05_0047 + 8524345-8524414,8524687-8524776,8525004-8525306,852... 28 5.1
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535... 27 8.9
04_01_0272 + 3624910-3625247,3625286-3625853,3625920-3626895,362... 27 8.9
>01_01_1152 + 9170628-9171899
Length = 423
Score = 49.2 bits (112), Expect = 3e-06
Identities = 36/152 (23%), Positives = 70/152 (46%), Gaps = 3/152 (1%)
Frame = +3
Query: 168 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEA-TNPYISLSKTFSEMN 344
G+ +N + SPL + L GA ++ E+ FLG +E +P L +
Sbjct: 56 GQGRNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLP 115
Query: 345 PDFFTMANKIYVGNKYTLDEKFT-SSSRQYQSEVETIDF-SDTKKAADIINQWANEKTRG 518
F A ++V L +F +++ +Y + E DF + ++A + +N + ++ T G
Sbjct: 116 NTSF--ACGVWVDRGRALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEG 173
Query: 519 PIXSPISDDTIDPNAAAGLFNVIFFQGHWHVP 614
I + +++D + L N + F+G W +P
Sbjct: 174 LIRDVLPPNSVDSSTVVVLANAVHFKGTWSLP 205
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 48.4 bits (110), Expect = 4e-06
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 10/156 (6%)
Frame = +3
Query: 168 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVD--YSEATNPYISLSKTFSEM 341
G DKN+ SPL + + L +GA + +I FLG A +++L +
Sbjct: 29 GGDKNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDS 88
Query: 342 NPDF------FTMANKIYVGNKYTLDEKFTSS-SRQYQSEVETIDFSDT-KKAADIINQW 497
P AN ++V L + + +Y++E + F D ++A IN+W
Sbjct: 89 GPGDDRGGPKVRFANGVWVDAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEW 148
Query: 498 ANEKTRGPIXSPISDDTIDPNAAAGLFNVIFFQGHW 605
T G I + D +D A L N ++F+G W
Sbjct: 149 FESATAGRIKDFLPKDAVDRATPAVLGNALYFKGDW 184
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = +3
Query: 363 ANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDFSDTKK-AADIINQWANEKTRGPIXSPI 536
A ++ +L +F + Y S + DF + + A D IN W + T+G + + +
Sbjct: 103 AGGVWADASRSLSPEFVGLAGNVYGSAAKKADFKNKPEDAPDQINSWVKDSTKGTVTTLL 162
Query: 537 SDDTIDPNAAAGLFNVIFFQGHW 605
TID N L + ++F+G W
Sbjct: 163 PAGTIDQNTGLVLGSALYFRGRW 185
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 37.9 bits (84), Expect = 0.006
Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 6/166 (3%)
Frame = +3
Query: 135 SMKLLKEAYTSG--KDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDV---DYSEA 299
+++L K G ++NVV SP+ + + L SGA + E+ LG D E+
Sbjct: 15 ALRLAKRLADDGDNSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEES 74
Query: 300 TNPYISLSKTF-SEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSDTKKA 476
+ + SE + A ++ + L + ++ Q Q + S KK
Sbjct: 75 VRRAVEVGLADESESGGPRVSYACGVWHDERLALKPAYRAADFQRQPK------SSRKK- 127
Query: 477 ADIINQWANEKTRGPIXSPISDDTIDPNAAAGLFNVIFFQGHWHVP 614
IN+W ++ T I + D ++ A L N I+F+G W P
Sbjct: 128 ---INKWVSKATNKLIREILPDGSVHGGTALVLVNAIYFKGKWSNP 170
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 37.5 bits (83), Expect = 0.008
Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 9/156 (5%)
Frame = +3
Query: 174 DKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLG-----DVDYSEATNPYISLSKTFSE 338
+KN+V SP + + L +GA + E+ LG D++ S + L+ +
Sbjct: 30 NKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADESAS 89
Query: 339 MNPDFFTMANKIYVGNKYTLDEK---FTSSSRQYQSEVETIDFS-DTKKAADIINQWANE 506
P +++ V + TL+ K +++ Y++ +F K++ IN+W ++
Sbjct: 90 GGP---RVSDACGVWHDETLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVSK 146
Query: 507 KTRGPIXSPISDDTIDPNAAAGLFNVIFFQGHWHVP 614
T I + D ++ + A L N I+F+G W P
Sbjct: 147 ATNKLIPEILPDGSVHVDTALVLVNAIYFKGKWSNP 182
>11_01_0771 + 6453130-6454488
Length = 452
Score = 33.5 bits (73), Expect = 0.14
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +3
Query: 468 KKAADIINQWANEKTRGPIXSPISDDTIDPNAAAGLFNVIFFQGHWHVP 614
++A IN WA T I + ++ P A L N I+F+G W P
Sbjct: 171 EEARKQINAWARRATGKLITDVLPPRSVGPETAVVLGNAIYFKGKWDRP 219
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 462 DTKKAADIINQWANEKTRGPIXSPISDDTIDPNAAAGLFNVIFFQGHWHVP 614
+ KK+ IN+W ++ T I + D ++ L N I+F+G W P
Sbjct: 82 EPKKSRKKINEWVSKATNKLIPEILPDGSVHRLTTLVLVNAIYFKGKWSDP 132
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 33.1 bits (72), Expect = 0.18
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 429 YQSEVETIDFSDTK-KAADIINQWANEKTRGPIXSPISDDTIDPNAAAGLFNVIFFQGHW 605
Y+ T+DF + +A IN W T+ I I ++ + + N I+F+G W
Sbjct: 42 YKGAASTVDFKNHPVEARKEINAWVARATKNLITEVIKPESQSVDTRHVVGNAIYFKGEW 101
Query: 606 HVP 614
P
Sbjct: 102 LAP 104
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 30.7 bits (66), Expect = 0.96
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = +3
Query: 444 ETIDFSDTKKAADI---INQWANEKTRGPIXSPISDDTIDPNAAAGLFNVIFFQGHW 605
E I + KAA++ +N W + T G I + ++D L N ++F+G W
Sbjct: 200 EPITHWTSGKAAEVASQVNSWVEKVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 256
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/104 (23%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Frame = +3
Query: 168 GKDKNVVSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPY------ISLSKT 329
G +NV SPL + + + L +GAG +R ++ LG +E + + + L+
Sbjct: 32 GAGRNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGPGSAEGLHAFAEQLVQLVLADA 91
Query: 330 FSEMNPDFFTMANKIYVGNKYTLDEKFTS-SSRQYQSEVETIDF 458
P A+ ++V +L + F + +Y++E ++DF
Sbjct: 92 SGAGGPR-VAFADGVFVDASLSLKKTFGDVAVGKYKAETHSVDF 134
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 486 INQWANEKTRGPIXSPISDDTIDPNAAAGLFNVIFFQGHW 605
+N W + T G I + + +I+ N L N ++F+G W
Sbjct: 469 VNSWVDRVTSGLIKNIATPRSINHNTKLVLANALYFKGAW 508
>05_07_0209 + 28420008-28421510
Length = 500
Score = 29.9 bits (64), Expect = 1.7
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = +3
Query: 249 SRVEIDKFLGDVDYSEATN---PYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSS 419
S +++ + L D D + A + P + + MNP FT+ + NK +L E+FT+S
Sbjct: 279 SVLQLHRLLVDQDAAAAASFPAPIDGVLDWVASMNPRVFTVVEQEADHNKSSLLERFTNS 338
Query: 420 SRQYQSEVETID 455
Y S ++++
Sbjct: 339 LFYYASMFDSLE 350
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 29.9 bits (64), Expect = 1.7
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +3
Query: 471 KAADIINQWANEKTRGPIXSPISDDTIDPNAAAGLFNVIFFQGHW 605
+ A +N W + T G I + ++D L N ++F+G W
Sbjct: 4 EVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAW 48
>02_02_0392 -
9649858-9650405,9650499-9650670,9650788-9650926,
9651113-9651334,9651422-9651495,9653042-9653661,
9653810-9653965,9655250-9655347,9655443-9655534,
9655891-9655977
Length = 735
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Frame = +3
Query: 357 TMANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSD--TKKAADIINQWANEKTRGPIXS 530
T I +GN +EK S Y + V +I F + IN A P
Sbjct: 337 TFPTTISLGN----NEKLLGQSLYYNATVSSIKFQTLVVVNGSSAINVTAGNVVLWP--E 390
Query: 531 PISDDTIDPNAAAGLFNVIFFQGH 602
P + DTID A G +IF QG+
Sbjct: 391 PYNKDTIDLLAKEGAKGIIFAQGN 414
>10_05_0047 +
8524345-8524414,8524687-8524776,8525004-8525306,
8525413-8525872,8525962-8526043,8526157-8526351
Length = 399
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 282 VDYSEATNPYISLSKTFSEMNPDFFTMANKIYVGNKYTLDEKFTSSSRQYQSEVETI 452
++ E N K E N D T NK+ ++ T +EK S+ R+ + + E I
Sbjct: 331 MELKEGDNSERKREKALEEYN-DEITRINKVAAASRLTAEEKRRSAERKVREKAERI 386
>11_08_0007 +
27551173-27551828,27552071-27552282,27553371-27553550,
27555154-27556187
Length = 693
Score = 27.5 bits (58), Expect = 8.9
Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 4/101 (3%)
Frame = +3
Query: 186 VSSPLGVMMLMLLYKSGAGEGSRVEIDKFLGDVDYSEATNPYIS---LSKTFSEMNPDFF 356
V +G + S G S V D G++ P +S SK S D +
Sbjct: 509 VDIAVGCAEALACMHSNIGHKSVVHGDVKSGNILLGNNLEPKVSDFGSSKLMSVAKSDNW 568
Query: 357 T-MANKIYVGNKYTLDEKFTSSSRQYQSEVETIDFSDTKKA 476
+ MA+K Y+ Y +FT S Y V ++ KKA
Sbjct: 569 SVMADKSYIDPAYIKTGRFTEKSDVYSFGVVLLELITRKKA 609
>04_01_0272 +
3624910-3625247,3625286-3625853,3625920-3626895,
3627053-3627087
Length = 638
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = -3
Query: 589 NITLKSPAAAFGSMVSSEIGDXIGPRVFSLA--H*LMMSAAFL--VSLKSIVSTSLWY 428
+I + SP A GS++ + GD G + +A + L+ A FL +S+ +++ W+
Sbjct: 255 SIRVVSPLATAGSLLIFQFGDKDGQHIADIAITYVLLTGAVFLEVISVHTVLCKGRWH 312
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,122,974
Number of Sequences: 37544
Number of extensions: 322342
Number of successful extensions: 880
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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