Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L22
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039042-8|AAC48243.1|  337|Caenorhabditis elegans Serpentine re...    29   2.9  
Z82278-9|CAE17877.1|  323|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z82070-8|CAE17980.1|  323|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF016448-16|AAM45377.1|  394|Caenorhabditis elegans Atg (autopha...    27   8.7  
AF016448-15|AAB65961.1|  412|Caenorhabditis elegans Atg (autopha...    27   8.7  
AF000263-10|AAM22070.1|  163|Caenorhabditis elegans Hypothetical...    27   8.7  
AF000263-9|AAO21391.2|  184|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF000263-8|AAK21461.1|  924|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical ...    27   8.7  

>AF039042-8|AAC48243.1|  337|Caenorhabditis elegans Serpentine
           receptor, class ab (class a-like) protein 25 protein.
          Length = 337

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 534 ADNMYYEIFSICVNNKFRYFFISVLSYDMYIYLLY 430
           + +MY  +  + V  K +YF I V+S  MY+Y +Y
Sbjct: 81  SSDMYLWMAPLAVCEKRQYFEICVISRSMYLYGIY 115


>Z82278-9|CAE17877.1|  323|Caenorhabditis elegans Hypothetical
           protein W04E12.9 protein.
          Length = 323

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 486 FRYFFISVLSYDMYIYLLYFIVKNRGTV 403
           F YF+    S+++YIYL  F+  N  T+
Sbjct: 11  FLYFYDHPSSHNLYIYLHLFVQSNTTTI 38


>Z82070-8|CAE17980.1|  323|Caenorhabditis elegans Hypothetical
           protein W04E12.9 protein.
          Length = 323

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = -1

Query: 486 FRYFFISVLSYDMYIYLLYFIVKNRGTV 403
           F YF+    S+++YIYL  F+  N  T+
Sbjct: 11  FLYFYDHPSSHNLYIYLHLFVQSNTTTI 38


>Z69361-1|CAE17943.1|  468|Caenorhabditis elegans Hypothetical
           protein T13H10.2 protein.
          Length = 468

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -3

Query: 466 CIVVRYVYLFTLFYSEK 416
           C+++ Y ++FT+FY E+
Sbjct: 46  CVIIFYFFVFTIFYHER 62


>AF016448-16|AAM45377.1|  394|Caenorhabditis elegans Atg (autophagy)
           related protein18, isoform b protein.
          Length = 394

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 530 IICTMRYFLFALIINLGTSLLVYCRTICIFIY 435
           IIC  R+    L + L    +V C   CI+IY
Sbjct: 95  IICDHRFNKSVLTVRLNRDRIVVCLEDCIYIY 126


>AF016448-15|AAB65961.1|  412|Caenorhabditis elegans Atg (autophagy)
           related protein18, isoform a protein.
          Length = 412

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 530 IICTMRYFLFALIINLGTSLLVYCRTICIFIY 435
           IIC  R+    L + L    +V C   CI+IY
Sbjct: 95  IICDHRFNKSVLTVRLNRDRIVVCLEDCIYIY 126


>AF000263-10|AAM22070.1|  163|Caenorhabditis elegans Hypothetical
           protein T08B2.5d protein.
          Length = 163

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 142 NSVHNNTSPYLLILSQLKDGQTENVLHLLNK 234
           NS HN T    L+  Q +  +TE  +H LN+
Sbjct: 45  NSFHNTTGRPDLVAMQARLAETEQAIHRLNE 75


>AF000263-9|AAO21391.2|  184|Caenorhabditis elegans Hypothetical
           protein T08B2.5e protein.
          Length = 184

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 142 NSVHNNTSPYLLILSQLKDGQTENVLHLLNK 234
           NS HN T    L+  Q +  +TE  +H LN+
Sbjct: 45  NSFHNTTGRPDLVAMQARLAETEQAIHRLNE 75


>AF000263-8|AAK21461.1|  924|Caenorhabditis elegans Hypothetical
           protein T08B2.5a protein.
          Length = 924

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 142 NSVHNNTSPYLLILSQLKDGQTENVLHLLNK 234
           NS HN T    L+  Q +  +TE  +H LN+
Sbjct: 45  NSFHNTTGRPDLVAMQARLAETEQAIHRLNE 75


>AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical
           protein T08B2.5b protein.
          Length = 925

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 142 NSVHNNTSPYLLILSQLKDGQTENVLHLLNK 234
           NS HN T    L+  Q +  +TE  +H LN+
Sbjct: 46  NSFHNTTGRPDLVAMQARLAETEQAIHRLNE 76


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,964,341
Number of Sequences: 27780
Number of extensions: 209822
Number of successful extensions: 552
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)