Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L21
         (581 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.9  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.8  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   5.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   5.8  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 388 AAGKVNLFHNDXHDITAKAFATRNMPDI 471
           AA K+N FH    D  +  F   ++PD+
Sbjct: 235 AASKLNSFHWHITDSHSFPFTAESLPDL 262


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 388 AAGKVNLFHNDXHDITAKAFATRNMPDIA 474
           AA K+N+FH    D  +    ++ +P +A
Sbjct: 265 AANKLNVFHWHLTDSQSFPLVSQRVPQLA 293


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/22 (36%), Positives = 10/22 (45%)
 Frame = +3

Query: 165 ARSSHAQLRWYLWCWS*STLCW 230
           AR  HA+     WC+     CW
Sbjct: 572 ARGIHAEALVPRWCYQNEGECW 593


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +2

Query: 17   TCSGRSSFYCLSLCASAFKADT*LSANLFTIFNTMRSLNY 136
            TC G S+   + +  +A  A +  S +  T +N   + NY
Sbjct: 1327 TCDGTSNVNVVDIVTTAKPAQSTTSVSTTTSWNPGSTTNY 1366


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -3

Query: 516  IVYSATDSVEVGYXSDIWHISGGESLRCDVVVIVVE 409
            IV SA   +EV   S   H+S      C ++  V+E
Sbjct: 1492 IVPSAEKFIEVSSNSITLHLSAWSDGGCPMLYFVIE 1527



 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 221  GTLTPAPEVPSELSVRAPCASL 156
            GT+ PA E+P E + +   A+L
Sbjct: 1587 GTIAPAREIPKEDTFQIILANL 1608


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,224
Number of Sequences: 336
Number of extensions: 2750
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)