Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L20
         (363 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced prot...    21   4.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   4.5  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    21   5.9  

>AB264334-1|BAF44089.1|   30|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 30

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 88  CRLCRGDWRGRAGGPHSRSGC 150
           CR+C     G   G HS  GC
Sbjct: 9   CRVCGDKASGFHYGVHSCEGC 29


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 4.5
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +1

Query: 88  CRLCRGDWRGRAGGPHSRSGC 150
           CR+C     G   G HS  GC
Sbjct: 67  CRVCGDKASGFHYGVHSCEGC 87


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 20.6 bits (41), Expect = 5.9
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = -2

Query: 101 RHNRHHQDYHSEYGCEPECSL 39
           R  RH Q+ H+    EP C++
Sbjct: 17  RLRRHIQNVHTRPSKEPICNI 37


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,698
Number of Sequences: 438
Number of extensions: 778
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8556345
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)