Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_L18
(589 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 40 0.001
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 40 0.002
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 38 0.005
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 36 0.015
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 35 0.035
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 33 0.14
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 32 0.25
At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family pro... 30 1.3
At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR... 29 1.7
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 29 2.3
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 29 2.3
At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger) fa... 28 4.0
At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II... 28 4.0
At3g26920.1 68416.m03368 F-box family protein contains F-box dom... 28 4.0
At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger) fa... 28 4.0
At4g37110.1 68417.m05256 expressed protein 28 5.3
At4g15075.1 68417.m02316 hypothetical protein 28 5.3
At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger) fa... 27 7.0
At3g27220.1 68416.m03403 kelch repeat-containing protein contain... 27 7.0
At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger) fa... 27 7.0
At5g42870.1 68418.m05225 lipin family protein contains Pfam prof... 23 7.4
At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein ... 27 9.3
At5g35840.1 68418.m04306 phytochrome C (PHYC) identical to SP|P1... 27 9.3
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 39.9 bits (89), Expect = 0.001
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 318 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPKRK 428
+ +P +R +F S + +A YGF G+DL W+ P+ +
Sbjct: 88 MASNPDSRASFIQSTITVARSYGFHGLDLDWEYPRNE 124
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 39.5 bits (88), Expect = 0.002
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 309 YNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 419
Y + +P +R +F +S++ +A YGF G+DL W+ P
Sbjct: 106 YASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP 142
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 37.9 bits (84), Expect = 0.005
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 318 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 422
+ S R +F S + +A YGFDG+DL W+ P+
Sbjct: 1 MASSSYGRKSFILSTISIARSYGFDGLDLDWEYPR 35
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 36.3 bits (80), Expect = 0.015
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 318 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLPK 422
+ +P +R +F SA+ A Y FDG+DL W+ PK
Sbjct: 98 MASNPTSRKSFIWSAISSARYYRFDGLDLVWKYPK 132
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 35.1 bits (77), Expect = 0.035
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +3
Query: 318 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 419
+ +P +R F +S++ LA GF G+DL+W+ P
Sbjct: 107 MASNPTSRKLFISSSIKLARSCGFHGLDLNWKYP 140
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 33.1 bits (72), Expect = 0.14
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 333 QARTAFTNSALLLAEQYGFDGIDLSWQLP 419
Q+R F +S + +A GF G+DL+W+ P
Sbjct: 105 QSRKTFIDSWIFIARSNGFHGLDLAWEYP 133
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 32.3 bits (70), Expect = 0.25
Identities = 11/34 (32%), Positives = 23/34 (67%)
Frame = +3
Query: 318 LLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 419
++ + +R +F +S++ +A GF G+DL+W+ P
Sbjct: 79 IVSNRTSRESFISSSISIARSLGFYGLDLAWEYP 112
>At2g39720.1 68415.m04874 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 401
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 6 HHLVAKAKSSATMTARAISEN-LKHVCCLRTWSLLFRSAPICCTNLPASKLT 158
H V K +AR + N + H C+ W + S P+C LPA LT
Sbjct: 200 HCAVCKENFVLKSSAREMPCNHIYHPDCILPWLAIRNSCPVCRHELPAEDLT 251
>At2g22650.1 68415.m02684 FAD-dependent oxidoreductase family
protein
Length = 420
Score = 29.9 bits (64), Expect = 1.3
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 384 GFDGIDLSWQLPKRKPKKIRSSI 452
GF GI ++W L K PK++R S+
Sbjct: 30 GFAGISVAWHLLKESPKELRLSV 52
>At1g65850.1 68414.m07472 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1036
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 111 RSAPICCTNLPASKLTHIKWFHSM 182
RS PIC T P+S +H KW H +
Sbjct: 13 RSCPICATPFPSSSSSH-KWTHQV 35
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 339 RTAFTNSALLLAEQYGFDGIDLSWQLP 419
R AF +S++ +A + F G+DL+W+ P
Sbjct: 112 RKAFIDSSIDIARKKDFYGLDLAWEYP 138
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 339 RTAFTNSALLLAEQYGFDGIDLSWQLP 419
R AF +S++ +A + F G+DL+W+ P
Sbjct: 104 RKAFIDSSIDIARKKDFYGLDLAWEYP 130
>At5g10650.1 68418.m01233 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 525
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 86 PTDLEPALSFCTHLLYKSAG 145
PTD P+LSFC +Y S G
Sbjct: 321 PTDPNPSLSFCPSNIYSSTG 340
>At4g18010.2 68417.m02680 inositol polyphosphate 5-phosphatase II
(IP5PII) nearly identical to inositol polyphosphate
5-phosphatase II [Arabidopsis thaliana] GI:10444263
isoform contains an AT-acceptor splice site at intron 6
Length = 613
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 318 LLESPQARTAFTNSALLLAEQYGFDGIDLSW-QLPKRKPKKIRSSIG 455
L E+P + F + A L F+ ++LSW + + KIR+S G
Sbjct: 292 LPENPSGASRFASEARQLKRSRSFETLNLSWNDIKEEDGDKIRNSYG 338
>At3g26920.1 68416.m03368 F-box family protein contains F-box domain
Pfam:PF00646
Length = 565
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -1
Query: 475 LMLCQKDPILERIFFGFLFGNCQ 407
L+L K P LE + GF FG C+
Sbjct: 336 LLLSNKAPFLESLHLGFRFGECR 358
>At2g18650.1 68415.m02173 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHX1a
[Arabidopsis thaliana] GI:3790591; contains Pfam profile
PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 423
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 75 HVCCLRTWSLLFRSAPICCTNLPASKLTH 161
HV C+ TW L + P+C +NL + +H
Sbjct: 150 HVECIDTWLLSHSTCPLCRSNLLSGFSSH 178
>At4g37110.1 68417.m05256 expressed protein
Length = 417
Score = 27.9 bits (59), Expect = 5.3
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 170 PFYMCQLGCRQICTADGCRTKEQAPSP*AAY-VLEIL*YSSCCH 42
P ++C + CR IC CRTK+ AAY + L Y S H
Sbjct: 228 PDWICPV-CRDICNCSFCRTKKGWLPTGAAYRKIHKLGYKSVAH 270
>At4g15075.1 68417.m02316 hypothetical protein
Length = 168
Score = 27.9 bits (59), Expect = 5.3
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = +3
Query: 69 LKHVCCLRTWSLLFRSAP 122
L++ CCL+T ++LF+S P
Sbjct: 126 LRNACCLKTATILFKSTP 143
>At5g56340.1 68418.m07032 zinc finger (C3HC4-type RING finger)
family protein contains Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 396
Score = 27.5 bits (58), Expect = 7.0
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 75 HVCCLRTWSLLFRSAPICCTNLPAS 149
HV C+ W L S P+C LP+S
Sbjct: 282 HVRCIVPWLELHSSCPVCRFELPSS 306
>At3g27220.1 68416.m03403 kelch repeat-containing protein contains
Pfam PF01344: Kelch motif (4 repeats); contains Prosite
PS00334: Myb DNA-binding domain repeat signature 2;
similar to Male enhanced Antigen-1 (peas) (GI:20513270)
[Mus musculus]
Length = 426
Score = 27.5 bits (58), Expect = 7.0
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 351 TNSALLLAEQYGFDGIDLSWQLPKRKPKKIRSSIGSFWH 467
T +L+ E + F L+W + R P ++++++ FW+
Sbjct: 355 TKRLVLVGEIFRFQLDTLTWSVIGRLPYRVKTAMAGFWN 393
>At2g46160.1 68415.m05740 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 zinc finger protein
ATL6 [Arabidopsis thaliana] GI:4928403; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 214
Score = 27.5 bits (58), Expect = 7.0
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 75 HVCCLRTWSLLFRSAPIC 128
H+CCL W L S P+C
Sbjct: 162 HLCCLDAWLKLNGSCPVC 179
>At5g42870.1 68418.m05225 lipin family protein contains Pfam
profile: PF04571 lipin, N-terminal conserved region
Length = 930
Score = 23.0 bits (47), Expect(2) = 7.4
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 107 LSFCTHLLYKSAGIQADTYKMVSLNENLDIDR 202
LS C HLL S G+ A+ +E LD+++
Sbjct: 542 LSLCKHLL--SEGMGAEAASQAFNSEKLDMEK 571
Score = 22.6 bits (46), Expect(2) = 7.4
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 2 PASPSSQSKVLCYYDSKSYIRESQARMLPTDLE 100
P+ P SQS C+ SK +RE ++ D E
Sbjct: 486 PSQPLSQSFDPCFNTSKLDLREDESSSGGLDAE 518
>At5g44260.1 68418.m05416 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 381
Score = 27.1 bits (57), Expect = 9.3
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -2
Query: 303 CGSSVSSSPPTVKNTRN*GNCLF 235
CG S SSSP +V + +N CLF
Sbjct: 177 CGGSPSSSPASVLSNKNNRCCLF 199
>At5g35840.1 68418.m04306 phytochrome C (PHYC) identical to SP|P14714
Phytochrome C {Arabidopsis thaliana}
Length = 1111
Score = 27.1 bits (57), Expect = 9.3
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -2
Query: 249 GNCLFKFVIAR*LACARSMSKFSLSETILYVSAWMPADLYSRWVQNERAGSKSVG 85
G C+ VIAR A + M + L I++ + +P DL Q R G+ G
Sbjct: 1019 GLCVSFKVIARIEAIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREG 1073
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,798,743
Number of Sequences: 28952
Number of extensions: 231324
Number of successful extensions: 778
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 778
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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