Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L16
         (579 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    25   0.46 
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   4.3  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    22   4.3  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    22   4.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   7.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   7.6  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 25.0 bits (52), Expect = 0.46
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = -3

Query: 316 SGPVIK--ASHSKKFSSLIGPAIIPSGGFRVSCLYSAISRLSADPAIALIF 170
           SG V+K  A  ++ FSSL+ PA+    G   + + S  + +S    +A++F
Sbjct: 265 SGQVMKYAALATENFSSLLEPAVGTMTGAGGTAIVSISTSVSTSVYLAIVF 315


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 337 PPSKQVPSGPVIKASH 290
           P S QVP  P++ +SH
Sbjct: 141 PGSLQVPGAPMMMSSH 156


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = -2

Query: 446 DLPICIYIRVEHVTYKLHXRWTQWIIRRKNK 354
           +L  C Y+ +  V Y+L   + + +++  N+
Sbjct: 195 ELQYCHYLNILRVRYQLLNEYLETLVQETNR 225


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = -2

Query: 446 DLPICIYIRVEHVTYKLHXRWTQWIIRRKNK 354
           +L  C Y+ +  V Y+L   + + +++  N+
Sbjct: 195 ELQYCHYLNILRVRYQLLNEYLETLVQETNR 225


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 493 SYPMGSSPGACSMDIQTCPSA 431
           S P GSSP   S    T P+A
Sbjct: 38  SSPSGSSPQHSSSSASTSPAA 58


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 493 SYPMGSSPGACSMDIQTCPSA 431
           S P GSSP   S    T P+A
Sbjct: 38  SSPSGSSPQHSSSSASTSPAA 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,308
Number of Sequences: 336
Number of extensions: 3151
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)