Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_L16
(579 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme Ubc3|Schizo... 211 5e-56
SPBC1105.09 |ubc15||ubiquitin conjugating enzyme Ubc15|Schizosac... 161 9e-41
SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enz... 106 2e-24
SPBC119.02 |ubc4||ubiquitin conjugating enzyme Ubc4|Schizosaccha... 97 2e-21
SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2... 90 2e-19
SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme Ubc13|Sch... 84 1e-17
SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme Hus5|Schizosacch... 79 6e-16
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 75 1e-14
SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme Ubc6|Schizosacc... 73 3e-14
SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme Ubc1|Schizosacch... 70 2e-13
SPBC1198.09 |ubc16||ubiquitin conjugating enzyme Ubc16|Schizosac... 69 7e-13
SPBC211.07c |ubc8||ubiquitin conjugating enzyme Ubc8|Schizosacch... 48 1e-06
SPCC777.10c |ubc12||ubiquitin conjugating enzyme Ubc12|Schizosac... 45 7e-06
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 33 0.023
SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces p... 26 3.5
SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces... 26 4.6
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 25 6.1
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 25 8.0
>SPBP16F5.04 |ubc3|ubcp3|ubiquitin conjugating enzyme
Ubc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 166
Score = 211 bits (516), Expect = 5e-56
Identities = 94/128 (73%), Positives = 107/128 (83%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
ALRRLM EYK+LT N P+GI AGP NE++FF W+ LI GP+GT FEGG++PA L FP DY
Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDY 65
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
PL PP ++F C+ FHPN+Y DG VCISILHAPGDDP YESSSERWSPVQSVEKIL SV+
Sbjct: 66 PLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVM 125
Query: 555 SMLAEPND 578
SMLAEPND
Sbjct: 126 SMLAEPND 133
>SPBC1105.09 |ubc15||ubiquitin conjugating enzyme
Ubc15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 167
Score = 161 bits (390), Expect = 9e-41
Identities = 70/133 (52%), Positives = 94/133 (70%), Gaps = 1/133 (0%)
Frame = +3
Query: 183 MAGSALRRLMA-EYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLI 359
M SA +L+ + K++ NPP+G G +++++ FEWE +I GPE T +EGG F A L
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLS 60
Query: 360 FPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKI 539
FP DYPL PP M+F +++HPN++ +G+VCISILH PGDD GYE + ERW PV S E I
Sbjct: 61 FPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETI 120
Query: 540 LWSVVSMLAEPND 578
L SV+SML+ PND
Sbjct: 121 LISVISMLSSPND 133
>SPAC18B11.07c |rhp6|ubc2|Rad6 homolog, ubiquitin conjugating enzyme
E2 Rhp6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 151
Score = 106 bits (255), Expect = 2e-24
Identities = 53/132 (40%), Positives = 77/132 (58%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M+ +A RRLM ++K++ +PP G+ A P+++ N W A+I GP T FE G F L F
Sbjct: 1 MSTTARRRLMRDFKRMQQDPPAGVSASPVSD-NVMLWNAVIIGPADTPFEDGTFKLVLSF 59
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
YP PP ++F+ MFHPN+YA+G++C+ IL RWSP V IL
Sbjct: 60 DEQYPNKPPLVKFVSTMFHPNVYANGELCLDIL-------------QNRWSPTYDVAAIL 106
Query: 543 WSVVSMLAEPND 578
S+ S+L +PN+
Sbjct: 107 TSIQSLLNDPNN 118
>SPBC119.02 |ubc4||ubiquitin conjugating enzyme
Ubc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 97.1 bits (231), Expect = 2e-21
Identities = 45/127 (35%), Positives = 71/127 (55%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
AL+R+ E L +PP AGP+ ++ F W+A I GP + + GG+F + FP DY
Sbjct: 2 ALKRINRELADLGKDPPSSCSAGPVGDD-LFHWQATIMGPADSPYAGGVFFLSIHFPTDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F ++HPNI ++G +C+ IL ++WSP ++ K+L S+
Sbjct: 61 PFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>SPCC1259.15c |ubc11|ubcdp, ubcp4|ubiquitin conjugating enzyme E2-C
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 176
Score = 90.2 bits (214), Expect = 2e-19
Identities = 47/129 (36%), Positives = 68/129 (52%)
Frame = +3
Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
S +RL +E L ++ GI A P ++ N W ITGP T +EG F + FP +
Sbjct: 28 SVTKRLRSELMSLMMSNTPGISAFPDSDSNLLHWAGTITGPSDTYYEGLKFKISMSFPAN 87
Query: 372 YPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
YP SPP + F M+HPN+ G +C+ IL ++WS V +V+ IL S+
Sbjct: 88 YPYSPPTIIFTSPMWHPNVDMSGNICLDIL-------------KDKWSAVYNVQTILLSL 134
Query: 552 VSMLAEPND 578
S+L EPN+
Sbjct: 135 QSLLGEPNN 143
>SPAC11E3.04c |ubc13|spu13|ubiquitin conjugating enzyme
Ubc13|Schizosaccharomyces pombe|chr 1|||Manual
Length = 148
Score = 84.2 bits (199), Expect = 1e-17
Identities = 39/125 (31%), Positives = 71/125 (56%)
Frame = +3
Query: 201 RRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPL 380
+R++ E + LT +PP GI+A P E+N ++ + GP+ + +EGG F +L P +YP+
Sbjct: 5 KRIIKEIETLTRDPPPGIVAAP-TEDNLRYFKITMEGPQQSAYEGGKFHLELFLPDEYPM 63
Query: 381 SPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSM 560
PP ++F+ ++HPN+ G++C+S L + WSP + +L S+ ++
Sbjct: 64 MPPNVRFLTKIYHPNVDKLGRICLSTL-------------KKDWSPALQIRTVLLSIQAL 110
Query: 561 LAEPN 575
+ PN
Sbjct: 111 MGAPN 115
>SPAC30D11.13 |hus5|ubc9|SUMO conjugating enzyme
Hus5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 157
Score = 78.6 bits (185), Expect = 6e-16
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 4/135 (2%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEEN----FFEWEALITGPEGTCFEGGIFPA 350
M+ RL E KQ + P G A P + W+ I G T +EGG++
Sbjct: 1 MSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKL 60
Query: 351 KLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSV 530
+ FP +YP PP +F +FHPN+Y G VC+SIL + E W P ++
Sbjct: 61 TMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSIL-----------NEEEGWKPAITI 109
Query: 531 EKILWSVVSMLAEPN 575
++IL + +L +PN
Sbjct: 110 KQILLGIQDLLDDPN 124
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 74.5 bits (175), Expect = 1e-14
Identities = 40/134 (29%), Positives = 66/134 (49%)
Frame = +3
Query: 174 ISAMAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAK 353
+++ + S+ RRL EY L +P I + ++N F W GP + + GG F
Sbjct: 1 MASASPSSSRRLTKEYSDLREHPIPDIRVNLV-DDNLFHWACTALGPSDSVYAGGKFHFS 59
Query: 354 LIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVE 533
L FP DYP PP ++F ++HPN ++G VC++IL + + P +
Sbjct: 60 LKFPLDYPFQPPTIEFTTRIYHPNFDSEGNVCLAIL------------KQQVFKPSIKLR 107
Query: 534 KILWSVVSMLAEPN 575
+L ++ +L EPN
Sbjct: 108 SVLEQILQLLREPN 121
>SPAC10F6.05c |ubc6||ubiquitin conjugating enzyme
Ubc6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 227
Score = 72.9 bits (171), Expect = 3e-14
Identities = 35/70 (50%), Positives = 42/70 (60%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +RLM EY L NP E + A P E N EW +ITGP T +EGG + LIFPPDY
Sbjct: 6 AYKRLMKEYLALQKNPVELVDAKPATE-NILEWHYIITGPPDTPYEGGQYHGTLIFPPDY 64
Query: 375 PLSPPXMQFI 404
P PP ++ I
Sbjct: 65 PFKPPAIRMI 74
>SPBC2D10.20 |ubc1||ubiquitin conjugating enzyme
Ubc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 217
Score = 70.1 bits (164), Expect = 2e-13
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M+ + RR+ E + + GI IN++ + + GPEGT +EGG F +
Sbjct: 1 MSDNRSRRIAKELADVQQDKQAGIQVWTINDD-ISHLKGMFRGPEGTPYEGGYFVVDIEI 59
Query: 363 PPDYPLSPPXMQFICDMFHPNIYAD-GQVCISILHAPGDDPMGYESSSERWSPVQSVEKI 539
P DYP PP M F ++HPN+ + G +C+ IL ++WSPV +++
Sbjct: 60 PIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDIL-------------KDQWSPVYTMKSA 106
Query: 540 LWSVVSMLAEP 572
L S+ S+L P
Sbjct: 107 LISLQSLLCTP 117
>SPBC1198.09 |ubc16||ubiquitin conjugating enzyme
Ubc16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 160
Score = 68.5 bits (160), Expect = 7e-13
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Frame = +3
Query: 192 SALRRLMAEYKQLTLNPPEGIIA-GPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPP 368
S+++RL EY G++ P+ + + F W+A+I GP T +EGG + +
Sbjct: 3 SSIKRLHKEYASFQAGDISGLLLLKPVTDVDMFHWKAVIEGPTETPYEGGQWVLDIHVHE 62
Query: 369 DYPLSPPXMQFICDMFHPNI-YADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILW 545
YP+SPP + F + HPNI + +G+VC+ IL WSP S++
Sbjct: 63 GYPISPPSVYFQTKIVHPNISWTNGEVCMDIL-------------KTHWSPAWSLQSACL 109
Query: 546 SVVSMLA 566
+++S+L+
Sbjct: 110 AIISLLS 116
>SPBC211.07c |ubc8||ubiquitin conjugating enzyme
Ubc8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 47.6 bits (108), Expect = 1e-06
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +3
Query: 276 ENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNI-YADGQVCI 452
+N E+ GP T + GGI+ + P +YP P + F+ +FHPNI G VC+
Sbjct: 27 DNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPWKSPSIGFVNRIFHPNIDELSGSVCL 86
Query: 453 SILH 464
+++
Sbjct: 87 DVIN 90
>SPCC777.10c |ubc12||ubiquitin conjugating enzyme
Ubc12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 177
Score = 45.2 bits (102), Expect = 7e-06
Identities = 24/88 (27%), Positives = 44/88 (50%)
Frame = +3
Query: 312 PEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGY 491
P+ ++GG F ++ +YP PP ++ + ++HPNI +G VC++IL
Sbjct: 60 PDEGYYKGGKFKFRIQIDDNYPHDPPKVKCLNKIYHPNIDIEGNVCLNILR--------- 110
Query: 492 ESSSERWSPVQSVEKILWSVVSMLAEPN 575
+ W+PV ++ IL + + PN
Sbjct: 111 ----QDWNPVLNLNSILVGLQFLFLSPN 134
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 33.5 bits (73), Expect = 0.023
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +3
Query: 288 EWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQ 443
+W A I GP + E I+ K+ +YP +PP + F+ + P + DG+
Sbjct: 40 DWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGV--DGE 89
>SPBC725.05c |||nucleotide pyrophosphatase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 485
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 495 SSSERWSPVQSVEKILWSVVSML 563
S++ER +PV + + WS+VSML
Sbjct: 365 SNNERIAPVWMIPDVGWSLVSML 387
>SPAC343.07 |mug28||RNA-binding protein Mug28|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 609
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 488 PHGVVPRSVQYGYTDLPICIYIRVEHVTYKLHXRW-TQWIIRRKNKFGRKYTTFKAS 321
P ++ Q+GY+D + R++ KL + + +KFG K++TFK S
Sbjct: 542 PQPLIQSIQQHGYSDPRQTLPTRLDSCAAKLREAVISNENLNPSHKFGIKHSTFKTS 598
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 25.4 bits (53), Expect = 6.1
Identities = 21/75 (28%), Positives = 30/75 (40%)
Frame = +3
Query: 159 YLSMNISAMAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGG 338
Y I+ A +LR L Y+ PP+ I + N +WE T F G
Sbjct: 722 YFKEMITGYAKRSLRTLGLCYRVFDSWPPKDIPTNDEDSSNPLKWEDAFTDMTFLGFFGI 781
Query: 339 IFPAKLIFPPDYPLS 383
+ P + PD PL+
Sbjct: 782 MDPIR----PDVPLA 792
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 25.0 bits (52), Expect = 8.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 337 PPSKQVPSGPVIKASHSKKFSSLIG 263
PP+ Q + PV HS+ F S+ G
Sbjct: 79 PPTHQREASPVKNIEHSESFPSVFG 103
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,355,686
Number of Sequences: 5004
Number of extensions: 49140
Number of successful extensions: 140
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 131
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 248115846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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