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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L16
         (579 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)             150   9e-37
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)                     148   3e-36
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)                      69   2e-12
SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)                67   1e-11
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)                 65   3e-11
SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)                      65   5e-11
SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)              64   1e-10
SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)               58   5e-09
SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)              54   6e-08
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)                52   4e-07
SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)                50   2e-06
SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)                 50   2e-06
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)                49   2e-06
SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)                  45   5e-05
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   7e-04
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)                  38   0.008
SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.014
SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)                36   0.024
SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)                    35   0.042
SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.39 
SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)              32   0.39 
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.51 
SB_25036| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.3  
SB_2439| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   6.3  
SB_25695| Best HMM Match : PDEase_I (HMM E-Value=3.1e-36)              27   8.4  
SB_7619| Best HMM Match : ArfGap (HMM E-Value=5.3)                     27   8.4  
SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   8.4  
SB_15381| Best HMM Match : Homoserine_dh (HMM E-Value=6.8)             27   8.4  

>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 473

 Score =  150 bits (363), Expect = 9e-37
 Identities = 60/118 (50%), Positives = 85/118 (72%)
 Frame = +3

Query: 225 QLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFI 404
           +L   P EG  AG  ++E+ ++WE ++ GP GT +E G F A ++FP +YP  PP + FI
Sbjct: 343 ELQKKPVEGFSAGLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFI 402

Query: 405 CDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSMLAEPND 578
            D++HPN++ +G+VCISILH PG+D  GYE + ERW P+ +VE I+ SV+SMLAEPND
Sbjct: 403 SDIWHPNVHKNGEVCISILHEPGEDKYGYEKADERWRPIHTVETIMLSVISMLAEPND 460


>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 1282

 Score =  148 bits (359), Expect = 3e-36
 Identities = 69/128 (53%), Positives = 82/128 (64%)
 Frame = +3

Query: 192  SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
            SA+R L  E K+LT  P EG      +E N FEW+  I GP GT + GG F A + FP D
Sbjct: 1124 SAVRALQLELKKLTEEPVEGFTVEVPDESNTFEWDVAIFGPPGTLYAGGYFKAHMSFPHD 1183

Query: 372  YPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
            YP SPP  +F+  M+HPNIY  G VCISILH P DDP   E  SERW+P Q+V  IL SV
Sbjct: 1184 YPYSPPTFRFLTKMWHPNIYESGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSV 1243

Query: 552  VSMLAEPN 575
            +S+L EPN
Sbjct: 1244 ISLLNEPN 1251


>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 226

 Score = 69.3 bits (162), Expect = 2e-12
 Identities = 41/128 (32%), Positives = 63/128 (49%)
 Frame = +3

Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
           +A +R+  E  ++TL+PP    AGP  ++  +EW + I GP G+ +EGG+F   + FP D
Sbjct: 95  TAAKRIQRELTEITLDPPPNCSAGPKGDD-LYEWYSTILGPPGSVYEGGVFFLDIHFPSD 153

Query: 372 YPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
           YP  PP                G VC+ IL              + WSP  ++ K+L S+
Sbjct: 154 YPFKPP---------------KGMVCLDIL-------------KDSWSPALTISKVLLSI 185

Query: 552 VSMLAEPN 575
            S+L + N
Sbjct: 186 CSLLTDCN 193


>SB_44322| Best HMM Match : UQ_con (HMM E-Value=1.6e-37)
          Length = 190

 Score = 66.9 bits (156), Expect = 1e-11
 Identities = 30/91 (32%), Positives = 50/91 (54%)
 Frame = +3

Query: 303 ITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDP 482
           + G EGT +  GIF   +  P  YP  PP ++F+  ++HPNI + G++C+  L  P   P
Sbjct: 2   LIGAEGTPYHKGIFKLDIQIPERYPFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP---P 58

Query: 483 MGYESSSERWSPVQSVEKILWSVVSMLAEPN 575
            G       W P  ++  +L +++ ++AEPN
Sbjct: 59  KG------MWKPALNISSVLSTILILMAEPN 83


>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
          Length = 200

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 27/66 (40%), Positives = 41/66 (62%)
 Frame = +3

Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
           +A +R+  E  ++TL+PP    AGP  ++  +EW + I GP G+ +EGG+F   + FP D
Sbjct: 135 TAAKRIQRELTEITLDPPPNCSAGPKGDD-LYEWYSTILGPPGSVYEGGVFFLDIHFPSD 193

Query: 372 YPLSPP 389
           YP  PP
Sbjct: 194 YPFKPP 199


>SB_15708| Best HMM Match : UQ_con (HMM E-Value=0)
          Length = 145

 Score = 64.9 bits (151), Expect = 5e-11
 Identities = 31/102 (30%), Positives = 53/102 (51%)
 Frame = +3

Query: 267 INEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQV 446
           ++E N   W+ LI  PE   +  G F  ++ FP +YP  PP + F   ++HPNI   GQV
Sbjct: 18  VDESNILYWQGLIV-PEMPPYNKGAFRIEICFPAEYPFKPPKITFKTKIYHPNIDEKGQV 76

Query: 447 CISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSMLAEP 572
           C+ I+            S E W P    E+++ ++++++ +P
Sbjct: 77  CLPII------------SPENWKPATKTEQVIQALLALVHDP 106


>SB_28812| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 385

 Score = 63.7 bits (148), Expect = 1e-10
 Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
 Frame = +3

Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
           A++RLM E K+L  N  E   A P+ E+N FEW   + GP  T F GG +  ++I PP+Y
Sbjct: 11  AVKRLMREAKELR-NATELYHAQPL-EDNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEY 68

Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISI-LHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
           P+ PP +  +    +       ++C+S+  H P           E W P  S+  +L ++
Sbjct: 69  PMKPPSIMLLTP--NGRFEIGKKICLSMSAHHP-----------ETWQPSWSIRTVLMAI 115

Query: 552 VSML 563
           +  +
Sbjct: 116 IGFM 119


>SB_5638| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 151

 Score = 58.0 bits (134), Expect = 5e-09
 Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 5/60 (8%)
 Frame = +3

Query: 297 ALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICD-----MFHPNIYADGQVCISIL 461
           ALITGP  T +EGG F   +  PPDYP+ PP ++ +        F+PN+Y +G+VC+SI+
Sbjct: 15  ALITGPFDTPYEGGFFYFLIRCPPDYPIRPPRVKLMTTGSGQVRFNPNLYRNGKVCLSII 74


>SB_24498| Best HMM Match : Galactosyl_T_2 (HMM E-Value=0)
          Length = 446

 Score = 54.4 bits (125), Expect = 6e-08
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = +3

Query: 483 MGYESSSERWSPVQSVEKILWSVVSMLA 566
           MGYESS+ERWSPVQSVEKIL SV+SMLA
Sbjct: 1   MGYESSAERWSPVQSVEKILLSVISMLA 28


>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
          Length = 739

 Score = 51.6 bits (118), Expect = 4e-07
 Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
 Frame = +3

Query: 291 WEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFI--CD-MFHPNIYADGQVCIS 455
           +  +I GP GT ++ G+F   ++ P +YP +PP   ++  C+   +PN+Y DG+VCI+
Sbjct: 636 FRVMIEGPAGTPYDHGLFAFDILLPANYPDAPPSFHYLSMCNGRLNPNLYEDGKVCIT 693


>SB_28696| Best HMM Match : UQ_con (HMM E-Value=5.3e-30)
          Length = 204

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 21/67 (31%), Positives = 38/67 (56%)
 Frame = +3

Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
           P  PP ++F+  ++HPNI + G++C+  L  P   P G       W P  ++  +L +++
Sbjct: 40  PFEPPKVRFVTPIYHPNIDSSGRICLDTLKMP---PKG------MWKPALNISSVLSTIL 90

Query: 555 SMLAEPN 575
            ++AEPN
Sbjct: 91  ILMAEPN 97


>SB_3717| Best HMM Match : UQ_con (HMM E-Value=0.00017)
          Length = 123

 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 17/43 (39%), Positives = 26/43 (60%)
 Frame = +3

Query: 276 ENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFI 404
           +N FEW   + GP  T F GG +  ++I PP+YP+ PP +  +
Sbjct: 1   DNLFEWHFTVRGPPDTEFAGGRYHGRIILPPEYPMKPPSIMLL 43


>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
          Length = 181

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +3

Query: 258 AGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPP 389
           AGP  ++  +EW + I GP G+ +EGG+F   + FP DYP  PP
Sbjct: 44  AGPKGDK-LYEWYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPP 86


>SB_26077| Best HMM Match : UQ_con (HMM E-Value=6e-18)
          Length = 215

 Score = 44.8 bits (101), Expect = 5e-05
 Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
 Frame = +3

Query: 273 EENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNI-YADGQVC 449
           E+N  E+E  IT  +G  + GG F    +   DYP +PP  + + +++HPN+   DG VC
Sbjct: 33  EDNMEEFELQITPTDGA-YRGGQFKFS-VKTEDYPNTPPVPRCVNNIYHPNMDLDDGSVC 90

Query: 450 ISIL 461
           +S+L
Sbjct: 91  LSLL 94


>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 269

 Score = 31.1 bits (67), Expect(2) = 7e-04
 Identities = 15/59 (25%), Positives = 30/59 (50%)
 Frame = +3

Query: 399 FICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSMLAEPN 575
           F+  +FHPN+  +G++C++ L              + W P   ++++L +V  +L  PN
Sbjct: 147 FLTKIFHPNVAKNGEICVNTL-------------KKDWKPDLGIKQVLLTVKCLLIVPN 192



 Score = 29.1 bits (62), Expect(2) = 7e-04
 Identities = 16/50 (32%), Positives = 27/50 (54%)
 Frame = +3

Query: 165 SMNISAMAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGP 314
           S N+   +   ++++  E   LT +PPEGI     N+E+  + +A I GP
Sbjct: 96  SSNVENFSPQIIKQVAREIHGLTNDPPEGIKVFS-NDEDITDIQASIEGP 144


>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
          Length = 841

 Score = 37.5 bits (83), Expect = 0.008
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = +3

Query: 273 EENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPP 389
           +E F + +  I GP  T FEGG +   ++ P  YP +PP
Sbjct: 683 DETFTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPP 721


>SB_26178| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 897

 Score = 36.7 bits (81), Expect = 0.014
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
 Frame = +3

Query: 201  RRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCF------EGG--IFPAKL 356
            +RLM E++ ++    E I +  + ++N FEW   +   +G         E G       +
Sbjct: 737  KRLMKEFQDVS-RKTERIFSAELVDDNLFEWNVKLHTIDGDSLLYRDMVETGSKFILLNI 795

Query: 357  IFPPDYPLSPPXMQFICDMFHPNIYAD-GQVCISILHAPG 473
             FP ++P +PP M+ +          D G +C+ +L   G
Sbjct: 796  TFPENFPFAPPFMRVLAPRIEGGFVLDGGAICMELLTPKG 835


>SB_26076| Best HMM Match : UQ_con (HMM E-Value=3.6e-15)
          Length = 243

 Score = 35.9 bits (79), Expect = 0.024
 Identities = 21/63 (33%), Positives = 32/63 (50%)
 Frame = +3

Query: 273 EENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCI 452
           E+N  E+E  IT  +G  + GG F    +   DYP   P +     ++HPN+     VC+
Sbjct: 33  EDNMEEFELQITPTDGA-YRGGQFKFS-VRTTDYPNVAPSINCKTKIYHPNMDGYDGVCM 90

Query: 453 SIL 461
           S+L
Sbjct: 91  SLL 93


>SB_36444| Best HMM Match : UQ_con (HMM E-Value=2.8)
          Length = 55

 Score = 35.1 bits (77), Expect = 0.042
 Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
 Frame = +3

Query: 273 EENFFEW-EALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFI 404
           +EN  ++  AL+TGP  T +  G F   + FP  YP  PP ++ I
Sbjct: 1   DENRMDFARALVTGPVDTPYSRGCFVFDIFFPGTYPNVPPLVKLI 45


>SB_39170| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 79

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +3

Query: 321 TCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQ 443
           T FE  I+  K++  P+YP  PP ++F+  +    + + G+
Sbjct: 1   TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41


>SB_35256| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 41

 Score = 31.9 bits (69), Expect = 0.39
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = +3

Query: 321 TCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQ 443
           T FE  I+  K++  P+YP  PP ++F+  +    + + G+
Sbjct: 1   TVFENRIYNLKIVCGPNYPQKPPTVKFVSKINMNGVNSKGE 41


>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 710

 Score = 31.5 bits (68), Expect = 0.51
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = +3

Query: 309 GPEGTCFEGGIFPAKLIFPPDYPLSPPXM 395
           GP GT +EGG++  ++  P  YP   P +
Sbjct: 56  GPVGTPYEGGVWKVRVDLPEKYPFKSPSI 84


>SB_25036| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 192

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 18/71 (25%), Positives = 26/71 (36%)
 Frame = -3

Query: 457 MDIQTCPSAYILGWNMSHINCXXXXXXXXXXGKISLAGNIPPSKQVPSGPVIKASHSKKF 278
           MD  T PS  IL    +               +++ +G +PP   +  G   KA    K 
Sbjct: 1   MDDST-PSVQILAERFNEFLLGLTSNFAPISQQVTCSGPVPPELLITPGKAFKALSRLKV 59

Query: 277 SSLIGPAIIPS 245
               GP  +PS
Sbjct: 60  KKSSGPDPVPS 70


>SB_2439| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 951

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/71 (26%), Positives = 27/71 (38%)
 Frame = -3

Query: 457 MDIQTCPSAYILGWNMSHINCXXXXXXXXXXGKISLAGNIPPSKQVPSGPVIKASHSKKF 278
           MD  T PS  IL    +               +++ +G +PP   +  G   KA    K 
Sbjct: 597 MDDST-PSVQILAERFNEFLLGLMSNFAPISQQVTSSGPVPPELLITPGKAFKALSRIKL 655

Query: 277 SSLIGPAIIPS 245
            +  GP  IPS
Sbjct: 656 KNSSGPDPIPS 666


>SB_25695| Best HMM Match : PDEase_I (HMM E-Value=3.1e-36)
          Length = 646

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +3

Query: 243 PEGIIAG-PINEENFFEWEALITGPEGTCFEGGIFPAKLIFPP-DYP 377
           PE + +G P +E++ F  + ++TG  G   +G + PA    PP ++P
Sbjct: 17  PEALESGGPGDEDSTFITQGVLTGGTGNQQKGALEPAPPALPPSEFP 63


>SB_7619| Best HMM Match : ArfGap (HMM E-Value=5.3)
          Length = 483

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 18/71 (25%), Positives = 26/71 (36%)
 Frame = -3

Query: 457 MDIQTCPSAYILGWNMSHINCXXXXXXXXXXGKISLAGNIPPSKQVPSGPVIKASHSKKF 278
           MD  T PS  IL    +               +++ +G +PP   +  G   KA    K 
Sbjct: 121 MDDST-PSVQILAERFNEFVLGLTSNFAPISQQVTCSGPVPPELLITPGKAFKALSRIKV 179

Query: 277 SSLIGPAIIPS 245
               GP  +PS
Sbjct: 180 KKSSGPDPVPS 190


>SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 957

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 291 WEALITGPEGTCFEGGIFPAKLIFPPDY 374
           WE +  G +G C EG     K  +PP +
Sbjct: 527 WETMQKGTQGACTEGSDADRKTPYPPHF 554


>SB_15381| Best HMM Match : Homoserine_dh (HMM E-Value=6.8)
          Length = 489

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
 Frame = -2

Query: 404 YKLHXRWTQWII--RRKNKFGRKYTTFKASPFRSC 306
           Y    RW  W +  R K KFG++YT F  +  + C
Sbjct: 312 YDSFVRWHFWNLKERGKVKFGKRYTIFSPADDQPC 346


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,326,532
Number of Sequences: 59808
Number of extensions: 358138
Number of successful extensions: 780
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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