Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_L16
(579 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 235 2e-62
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 142 2e-34
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 138 3e-33
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 112 2e-25
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 112 2e-25
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 97 8e-21
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 97 8e-21
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 86 1e-17
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 86 2e-17
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 86 2e-17
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 83 2e-16
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 67 7e-12
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 63 1e-10
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 63 1e-10
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 62 2e-10
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 62 2e-10
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 60 1e-09
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 57 8e-09
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 52 3e-07
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 51 7e-07
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 48 4e-06
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 45 4e-05
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 39 0.003
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 34 0.063
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 32 0.34
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 32 0.34
AF125963-1|AAD14742.1| 339|Caenorhabditis elegans Serpentine re... 28 4.2
Z48585-3|CAA88485.1| 322|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 235 bits (574), Expect = 2e-62
Identities = 103/132 (78%), Positives = 115/132 (87%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
MAG AL+RLM EYK+LT PPEGIIA PI+E+NFFEWE LITGPE TCF G+FPA++ F
Sbjct: 1 MAGYALKRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITF 60
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
P DYPLSPP M+F C +FHPNIYADG+VCISILHAPGDDP GYE S+ERWSPVQS+EKIL
Sbjct: 61 PQDYPLSPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKIL 120
Query: 543 WSVVSMLAEPND 578
SVVSMLAEPND
Sbjct: 121 LSVVSMLAEPND 132
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 142 bits (343), Expect = 2e-34
Identities = 63/126 (50%), Positives = 87/126 (69%)
Frame = +3
Query: 198 LRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYP 377
L++ +A+ +++ P +G AG +++ + ++WE L+ GP T +EGG F A L FP DYP
Sbjct: 8 LKKQLADMRRV---PVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYP 64
Query: 378 LSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVS 557
PP M+FI +++HPNI +G VCISILH PGDD GYE ERW PV +VE IL SV+S
Sbjct: 65 QKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVIS 124
Query: 558 MLAEPN 575
ML +PN
Sbjct: 125 MLTDPN 130
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 138 bits (333), Expect = 3e-33
Identities = 64/133 (48%), Positives = 84/133 (63%)
Frame = +3
Query: 177 SAMAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKL 356
++ + ALR L E K L P EG +NE+N F W I GP T ++GG F A +
Sbjct: 5 ASTSSGALRALTMELKNLQSQPVEGFTID-VNEDNLFVWTVGIYGPPKTLYQGGYFKASI 63
Query: 357 IFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEK 536
FP +YP SPP M+F ++HPN+Y +G +CISILH+P DDP E + ERW+P QSV
Sbjct: 64 RFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRT 123
Query: 537 ILWSVVSMLAEPN 575
IL SV+S+L EPN
Sbjct: 124 ILLSVISLLNEPN 136
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 112 bits (269), Expect = 2e-25
Identities = 57/131 (43%), Positives = 74/131 (56%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M + RRLM ++K+L +PP G+ P E+N WEA+I GP+ T FE G F L F
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAP-TEDNILTWEAIIFGPQETPFEDGTFKLSLEF 59
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
+YP PP ++FI MFHPN+YADG +C+ IL RWSP V IL
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDVAAIL 106
Query: 543 WSVVSMLAEPN 575
S+ S+L EPN
Sbjct: 107 TSIQSLLDEPN 117
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 112 bits (269), Expect = 2e-25
Identities = 57/131 (43%), Positives = 74/131 (56%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M + RRLM ++K+L +PP G+ P E+N WEA+I GP+ T FE G F L F
Sbjct: 1 MTTPSRRRLMRDFKKLQEDPPAGVSGAP-TEDNILTWEAIIFGPQETPFEDGTFKLSLEF 59
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
+YP PP ++FI MFHPN+YADG +C+ IL RWSP V IL
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDIL-------------QNRWSPTYDVAAIL 106
Query: 543 WSVVSMLAEPN 575
S+ S+L EPN
Sbjct: 107 TSIQSLLDEPN 117
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/127 (35%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
AL+R+ E + L +PP AGP+ ++ F W+A I GP + ++GG+F + FP DY
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F ++HPNI ++G +C+ IL + +WSP ++ K+L S+
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRS-------------QWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLCDPN 114
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 97.1 bits (231), Expect = 8e-21
Identities = 45/127 (35%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
AL+R+ E + L +PP AGP+ ++ F W+A I GP + ++GG+F + FP DY
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTIHFPTDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F ++HPNI ++G +C+ IL + +WSP ++ K+L S+
Sbjct: 61 PFKPPKVAFTTRIYHPNINSNGSICLDILRS-------------QWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLCDPN 114
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 86.2 bits (204), Expect = 1e-17
Identities = 43/131 (32%), Positives = 74/131 (56%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
MAG RR++ E ++L +P GI A P +E N + +I GP+ + F GG+F +L
Sbjct: 1 MAGQLPRRIIKETQRLLADPVPGISANP-DESNARYFHVMIAGPDDSPFAGGVFKLELFL 59
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
P +YP++ P ++F+ ++HPNI G++C+ IL ++WSP + +L
Sbjct: 60 PEEYPMAAPKVRFMTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTVL 106
Query: 543 WSVVSMLAEPN 575
S+ ++L+ PN
Sbjct: 107 LSIQALLSAPN 117
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 85.8 bits (203), Expect = 2e-17
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEE----NFFEWEALITGPEGTCFEGGIFPA 350
M+G A RL E K + P G IA P+ N F WE I G + T +EGG++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 351 KLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSV 530
+++F D+P +PP +F +FHPN+Y G VC+S+L ++ W P S+
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLL-----------DENKDWKPSISI 109
Query: 531 EKILWSVVSMLAEPN 575
+++L + +L PN
Sbjct: 110 KQLLIGIQDLLNHPN 124
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 85.8 bits (203), Expect = 2e-17
Identities = 45/135 (33%), Positives = 70/135 (51%), Gaps = 4/135 (2%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEE----NFFEWEALITGPEGTCFEGGIFPA 350
M+G A RL E K + P G IA P+ N F WE I G + T +EGG++
Sbjct: 1 MSGIAAGRLAEERKHWRKDHPFGFIAKPVKNADGTLNLFNWECAIPGRKDTIWEGGLYRI 60
Query: 351 KLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSV 530
+++F D+P +PP +F +FHPN+Y G VC+S+L ++ W P S+
Sbjct: 61 RMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSLL-----------DENKDWKPSISI 109
Query: 531 EKILWSVVSMLAEPN 575
+++L + +L PN
Sbjct: 110 KQLLIGIQDLLNHPN 124
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 82.6 bits (195), Expect = 2e-16
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 3/135 (2%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFF-EWEALITGPEGTCFEGGIFPAKLI 359
M+ +A RRLM E QL PEG++ + N +W+ + G EGT + G +F +
Sbjct: 1 MSDAATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFT 60
Query: 360 FPPDYPLSPPXMQFICDMF--HPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVE 533
F P YP + P + F+ + HP+IY++G +C+SIL S+ W+P SV+
Sbjct: 61 FGPQYPFNSPEVMFVGETIPAHPHIYSNGHICLSIL-------------SDDWTPALSVQ 107
Query: 534 KILWSVVSMLAEPND 578
+ S++SML+ +
Sbjct: 108 SVCLSILSMLSSSKE 122
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 67.3 bits (157), Expect = 7e-12
Identities = 44/124 (35%), Positives = 63/124 (50%)
Frame = +3
Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
+ +RRLM E +L P E A P+ E+N FEW I G GT FEGGI+ ++IFP D
Sbjct: 10 AGVRRLMKEAMELR-QPTEMYHAQPM-EDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPAD 67
Query: 372 YPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
YP+ PP + + + + +VC+SI GY E W P S+ L ++
Sbjct: 68 YPMKPPNLILLTP--NGRFELNKKVCLSI--------SGYH--PETWLPSWSIRTALLAL 115
Query: 552 VSML 563
+ L
Sbjct: 116 IGFL 119
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 63.3 bits (147), Expect = 1e-10
Identities = 35/127 (27%), Positives = 59/127 (46%)
Frame = +3
Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
SA RRL E L + E N +W L+ P+ + G F + FP D
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVD 60
Query: 372 YPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
YP PP + F ++HPN+ +G+ C+ I+ ++E W P E+++ ++
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLPIV------------TAENWKPATKTEQVMMAL 108
Query: 552 VSMLAEP 572
+S++ EP
Sbjct: 109 LSLINEP 115
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 63.3 bits (147), Expect = 1e-10
Identities = 37/129 (28%), Positives = 65/129 (50%)
Frame = +3
Query: 177 SAMAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKL 356
S ++ AL+RL +Y++L P + A P+ E N EW +I G T +EGGI+ KL
Sbjct: 3 SGVSTVALQRLKKDYQRLLKEPVPFMKAAPL-ETNILEWRYIIIGAPKTPYEGGIYMGKL 61
Query: 357 IFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEK 536
+FP D+P PP + + + + ++C+SI + + W+P +V
Sbjct: 62 LFPKDFPFKPPAILMLTP--NGRFQTNTRLCLSI----------SDYHPDTWNPAWTVST 109
Query: 537 ILWSVVSML 563
I+ ++S +
Sbjct: 110 IITGLMSFM 118
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 62.5 bits (145), Expect = 2e-10
Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Frame = +3
Query: 294 EALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICD-----MFHPNIYADGQVCISI 458
+ LI+GP+ T + G+F + FP YP SPP F+ F+PN+Y DG++C+SI
Sbjct: 446 KVLISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSI 505
Query: 459 LHAPGDDPMGYESSSERWSPVQSVEKILWSVVSML 563
L P E+W+P S+ ++L S+ ++
Sbjct: 506 LGTWEGRP------EEKWNPYCSLMQVLVSIQEVI 534
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 62.5 bits (145), Expect = 2e-10
Identities = 41/128 (32%), Positives = 64/128 (50%)
Frame = +3
Query: 186 AGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFP 365
+ SA+RRL +Y +L +P +GI A P NE+N EW + G T F GG + K+IF
Sbjct: 17 SSSAVRRLQKDYAKLMQDPVDGIKALP-NEDNILEWHYCLRGSPDTPFYGGYYWGKVIFK 75
Query: 366 PDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILW 545
++P SPP + I + + ++C+SI + E W+P +V IL
Sbjct: 76 ENFPWSPPAITMITP--NGRFQTNTRLCLSI----------SDYHPESWNPGWTVSAILI 123
Query: 546 SVVSMLAE 569
+ S + E
Sbjct: 124 GLHSFMNE 131
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 60.1 bits (139), Expect = 1e-09
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 4/97 (4%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPP---EGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAK 353
M+ A RL E K++ N GI+ +NE N E + I GP T + GG+F
Sbjct: 1 MSNIAFNRLQRECKEVVTNSEISETGIMIEILNE-NLTEIKGHIRGPPDTPYAGGMFDLD 59
Query: 354 LIFPPDYPLSPPXMQFICDMFHPNIYAD-GQVCISIL 461
+ P YP SPP ++F ++HPN+ + G +C+ IL
Sbjct: 60 IKIPDQYPFSPPNVKFSTKIWHPNVSSQTGVICLDIL 96
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 57.2 bits (132), Expect = 8e-09
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +3
Query: 288 EWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHA 467
E E +T EG + GG F K+ PP+Y PP ++ + ++HPNI DG +C+SIL
Sbjct: 60 ELELTVTPQEGI-YRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQ 118
Query: 468 PGDDPMGYESSSERWSPVQSVEKILWSVVSMLAEPND 578
D G W P +++ ++ +VS+ + D
Sbjct: 119 NSLDQYG-------WRPTRNLTDVVHGLVSLFNDLMD 148
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 52.0 bits (119), Expect = 3e-07
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%)
Frame = +3
Query: 243 PEGIIAGPINEEN---FFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDM 413
P+G A PI+ E + W + GP G+ +EGG + + F +P+ PP +F +
Sbjct: 52 PQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGEYEVSVNFHK-WPIIPPICEFKTPL 110
Query: 414 FHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSMLAEPN 575
HPN+ G + + +L E WS S++K+L + ++LA P+
Sbjct: 111 HHPNVDLRGSIYLKML------------EQEHWSSETSLKKLLREISNLLATPD 152
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 50.8 bits (116), Expect = 7e-07
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 6/136 (4%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAG---PINEENFFEWEALITGPEGTCFEGGIFPAK 353
M+ AL R+ + K++ N + AG I E N + + I GPEGT + GG F K
Sbjct: 15 MSNLALARVTRKCKEVA-NASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIK 73
Query: 354 LIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMG---YESSSERWSPVQ 524
+ P YP PP + I Y + I H G + ++W+
Sbjct: 74 VDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASL 133
Query: 525 SVEKILWSVVSMLAEP 572
++ +L S+ +ML P
Sbjct: 134 TLRTVLLSLQAMLCSP 149
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 309 GPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNI-YADGQVCISILH 464
GP+ T +E G++ ++ P YP P + F+ +FHPNI A G VC+ +++
Sbjct: 41 GPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 44.8 bits (101), Expect = 4e-05
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +3
Query: 294 EALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYA-DGQVCI 452
+ +I G E T +EGGIF + YP P ++FI ++HP++ DG +C+
Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICL 435
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/87 (27%), Positives = 43/87 (49%)
Frame = +3
Query: 315 EGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYE 494
+G ++ IF L +YP PP ++F +++HPN+ D C PM +
Sbjct: 53 DGVLYKNMIFTLTLDVNVEYPFKPPYLKFCHNVYHPNV--DPVTCELC------SPMLLQ 104
Query: 495 SSSERWSPVQSVEKILWSVVSMLAEPN 575
E W P ++E +L +++ +L EP+
Sbjct: 105 ---ENWKPETTMEDVLLNLIVLLNEPD 128
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIF 344
AL+R+ E L +PP G + ++ + W+A I GP + ++GGIF
Sbjct: 2 ALKRIQKELHDLGRDPPAQCSTGSVGDD-LYHWQATIMGPPESPYQGGIF 50
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 34.3 bits (75), Expect = 0.063
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3
Query: 303 ITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQF 401
I GP T +E G+F L FP +YP + P ++F
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKF 67
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 31.9 bits (69), Expect = 0.34
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 204 RLMAEYKQLTLNPPEGIIAGPINEEN---FFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
RL+ E ++ +G I+ + +++ W A I GP T +E I+ ++ +Y
Sbjct: 9 RLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNY 68
Query: 375 PLSPPXMQF 401
P PP ++F
Sbjct: 69 PREPPTVRF 77
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 31.9 bits (69), Expect = 0.34
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +3
Query: 267 INEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLS-PPXMQFICDMFHPNI 428
I+E + +I GP G+ +EGG F A + P S P + F +FHPN+
Sbjct: 56 IDETKQLLFHVIIDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNL 110
>AF125963-1|AAD14742.1| 339|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 20 protein.
Length = 339
Score = 28.3 bits (60), Expect = 4.2
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = -3
Query: 310 PVIKASHSKKFSSLIGPAIIPSG-GFRVSCLYSAISRLSADP----AIALIFIER*VKHP 146
P KA+HS+ S+L AIIP G V +++ S L P +I I I P
Sbjct: 224 PDTKAAHSQLLSALTAQAIIPMFLGIAVLLYFASQSGLFTSPILEYSIFAISILMPALSP 283
Query: 145 KTYIQFV 125
TY+ FV
Sbjct: 284 ITYLYFV 290
>Z48585-3|CAA88485.1| 322|Caenorhabditis elegans Hypothetical
protein ZK673.3 protein.
Length = 322
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -2
Query: 413 HVTYKLHXRWTQWIIRRKNKFGRKYTTFKASPFRSCY*SF 294
H Y L RW + ++ G ++T F F+S SF
Sbjct: 145 HAKYSLANRWCKVYTMIRSSLGEQFTKFDVRNFKSILQSF 184
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,021,043
Number of Sequences: 27780
Number of extensions: 281459
Number of successful extensions: 688
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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