Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_L16
(579 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 159 2e-39
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 157 7e-39
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 145 2e-35
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 109 1e-24
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 108 2e-24
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 108 2e-24
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 108 2e-24
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 106 9e-24
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 105 3e-23
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 104 4e-23
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 104 4e-23
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 104 5e-23
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 104 5e-23
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 104 5e-23
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 104 5e-23
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 103 7e-23
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 102 2e-22
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 100 8e-22
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 100 8e-22
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 99 1e-21
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 93 1e-19
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 91 5e-19
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 85 2e-17
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 84 6e-17
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 83 1e-16
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 83 1e-16
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 82 3e-16
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 81 7e-16
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 77 9e-15
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 77 9e-15
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 76 2e-14
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 73 1e-13
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 72 3e-13
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 70 1e-12
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 66 1e-11
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 66 2e-11
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 65 4e-11
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 65 4e-11
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 64 9e-11
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 61 5e-10
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 60 1e-09
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 56 2e-08
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 54 7e-08
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 51 6e-07
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 50 8e-07
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 50 1e-06
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 47 8e-06
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 46 1e-05
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 45 3e-05
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 44 1e-04
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 43 1e-04
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 41 5e-04
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 39 0.003
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 39 0.003
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 34 0.060
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 34 0.060
At5g61620.1 68418.m07732 myb family transcription factor contain... 28 5.2
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 159 bits (385), Expect = 2e-39
Identities = 69/132 (52%), Positives = 91/132 (68%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M A L + K L +P +G AG ++E+N FEW I GP T +EGG F A + F
Sbjct: 1 MNSQACLLLQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSF 60
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
P +YP SPP ++F D++HPN+Y DG+VCISILH PGDDP GYE +SERW+PV +VE I+
Sbjct: 61 PQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIM 120
Query: 543 WSVVSMLAEPND 578
S++SML+ PND
Sbjct: 121 LSIISMLSGPND 132
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 157 bits (380), Expect = 7e-39
Identities = 66/124 (53%), Positives = 89/124 (71%)
Frame = +3
Query: 207 LMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSP 386
L + K L P +G AG ++E+N F+W I GP T +EGG F A + FP +YP+SP
Sbjct: 10 LQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSP 69
Query: 387 PXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSMLA 566
P + F +M+HPN+Y+DG+VCISILH PGDDP GYE +SERW+PV +VE I+ S++SML+
Sbjct: 70 PTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLS 129
Query: 567 EPND 578
PND
Sbjct: 130 GPND 133
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 145 bits (352), Expect = 2e-35
Identities = 60/100 (60%), Positives = 76/100 (76%)
Frame = +3
Query: 279 NFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISI 458
N FEW I GP T +EGG F A + FP +YP SPP ++F DM+HPN+Y+DG+VCISI
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 459 LHAPGDDPMGYESSSERWSPVQSVEKILWSVVSMLAEPND 578
LH PGDDP GYE +SERW+PV +VE I+ S++SML+ PND
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPND 164
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 109 bits (262), Expect = 1e-24
Identities = 55/131 (41%), Positives = 74/131 (56%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M A +RLM ++K+L +PP GI P + N W ALI GPE T ++GG F L F
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAP-QDNNIMHWNALIFGPEDTPWDGGTFKLTLHF 59
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
DYP PP ++F+ MFHPNIYADG +C+ IL +WSP+ V +L
Sbjct: 60 TEDYPNKPPIVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAVL 106
Query: 543 WSVVSMLAEPN 575
S+ S+L +PN
Sbjct: 107 TSIQSLLCDPN 117
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 108 bits (260), Expect = 2e-24
Identities = 54/131 (41%), Positives = 75/131 (57%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M+ A +RLM ++K+L +PP GI P + N W A+I GP+ T ++GG F L F
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
DYP PP ++F+ MFHPNIYADG +C+ IL +WSP+ V IL
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAIL 106
Query: 543 WSVVSMLAEPN 575
S+ S+L +PN
Sbjct: 107 TSIQSLLCDPN 117
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 108 bits (260), Expect = 2e-24
Identities = 54/131 (41%), Positives = 75/131 (57%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M+ A +RLM ++K+L +PP GI P + N W A+I GP+ T ++GG F L F
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
DYP PP ++F+ MFHPNIYADG +C+ IL +WSP+ V IL
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAIL 106
Query: 543 WSVVSMLAEPN 575
S+ S+L +PN
Sbjct: 107 TSIQSLLCDPN 117
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 108 bits (260), Expect = 2e-24
Identities = 54/131 (41%), Positives = 75/131 (57%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M+ A +RLM ++K+L +PP GI P + N W A+I GP+ T ++GG F L F
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLSLQF 59
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
DYP PP ++F+ MFHPNIYADG +C+ IL +WSP+ V IL
Sbjct: 60 SEDYPNKPPTVRFVSRMFHPNIYADGSICLDIL-------------QNQWSPIYDVAAIL 106
Query: 543 WSVVSMLAEPN 575
S+ S+L +PN
Sbjct: 107 TSIQSLLCDPN 117
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 106 bits (255), Expect = 9e-24
Identities = 58/159 (36%), Positives = 88/159 (55%), Gaps = 1/159 (0%)
Frame = +3
Query: 102 FF**IIKLTNCM*VFGCFTYLSMNIS-AMAGSALRRLMAEYKQLTLNPPEGIIAGPINEE 278
FF +I LT + VF C + + N+ + A +R++ E K L +PP AGP+ E+
Sbjct: 2 FFFFLIHLTIGL-VFDCRVF-NWNLDRGILEMASKRILKELKDLQKDPPTSCSAGPVAED 59
Query: 279 NFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISI 458
F W+A I GP + + GG+F + FPPDYP PP + F +FHPNI ++G +C+ I
Sbjct: 60 -MFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDI 118
Query: 459 LHAPGDDPMGYESSSERWSPVQSVEKILWSVVSMLAEPN 575
L E+WSP ++ K+L S+ S+L +PN
Sbjct: 119 L-------------KEQWSPALTISKVLLSICSLLTDPN 144
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 105 bits (251), Expect = 3e-23
Identities = 49/127 (38%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R++ E K L +PP AGP+ E+ F W+A I GP + + GG+F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F +FHPNI ++G +C+ IL E+WSP ++ K+L S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 104 bits (250), Expect = 4e-23
Identities = 49/127 (38%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A RR++ E K+L +PP AGP E+ F W+A I GP + + GG+F + FPPDY
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGED-MFHWQATIMGPNESPYSGGVFLVNIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F +FHPNI ++G +C+ IL ++WSP ++ K+L S+
Sbjct: 61 PFKPPKVVFRTKVFHPNINSNGNICLDIL-------------KDQWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 104 bits (250), Expect = 4e-23
Identities = 48/127 (37%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R++ E K L +PP AGP+ E+ F W+A I GP + + GG+F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSDSPYSGGVFLVTIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F +FHPN+ ++G +C+ IL E+WSP ++ K+L S+
Sbjct: 61 PFKPPKVAFRTKVFHPNVNSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 104 bits (249), Expect = 5e-23
Identities = 49/127 (38%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R++ E K L +PP AGP+ E+ F W+A I GP + + GG+F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F +FHPNI ++G +C+ IL E+WSP ++ K+L S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 104 bits (249), Expect = 5e-23
Identities = 49/127 (38%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R++ E K L +PP AGP+ E+ F W+A I GP + + GG+F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPSESPYAGGVFLVTIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F +FHPNI ++G +C+ IL E+WSP ++ K+L S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 104 bits (249), Expect = 5e-23
Identities = 49/127 (38%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R++ E K L +PP AGP+ E+ F W+A I GP + + GG+F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F +FHPNI ++G +C+ IL E+WSP ++ K+L S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 104 bits (249), Expect = 5e-23
Identities = 49/127 (38%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R++ E K L +PP AGP+ E+ F W+A I GP + + GG+F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F +FHPNI ++G +C+ IL E+WSP ++ K+L S+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 103 bits (248), Expect = 7e-23
Identities = 48/127 (37%), Positives = 73/127 (57%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R++ E K L +PP AGP+ E+ F W+A I GP + + GG+F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAED-MFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F ++HPNI ++G +C+ IL E+WSP ++ K+L S+
Sbjct: 61 PFKPPKVSFKTKVYHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 102 bits (245), Expect = 2e-22
Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 1/128 (0%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEG-IIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
A +R++ E K L +PP I AGP+ E+ F W+A I GP + + GG+F + FPPD
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPD 60
Query: 372 YPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
YP PP + F +FHPNI ++G +C+ IL E+WSP ++ K+L S+
Sbjct: 61 YPFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSI 107
Query: 552 VSMLAEPN 575
S+L +PN
Sbjct: 108 CSLLTDPN 115
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (239), Expect = 8e-22
Identities = 48/127 (37%), Positives = 72/127 (56%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R+ E + L +PP AGP ++ F+W+A I GP + F GG+F + FPPDY
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDD-MFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F ++HPNI ++G +C+ IL E+WSP +V K+L S+
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTVSKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 100 bits (239), Expect = 8e-22
Identities = 48/127 (37%), Positives = 72/127 (56%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R+ E + L +PP AGP ++ F+W+A I GP + F GG+F + FPPDY
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDD-MFQWQATIMGPADSPFAGGVFLVTIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F ++HPNI ++G +C+ IL E+WSP +V K+L S+
Sbjct: 61 PFKPPKVAFRTKVYHPNINSNGSICLDIL-------------KEQWSPALTVSKVLLSIC 107
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 108 SLLTDPN 114
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 99 bits (238), Expect = 1e-21
Identities = 45/127 (35%), Positives = 69/127 (54%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R+ E + + +PP AGP+ EE+ F W+A I GP + + GG+F + F DY
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + F ++HPNI + G +C+ IL E+WSP + K+L S+
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDIL-------------KEQWSPAPTTSKVLLSIC 108
Query: 555 SMLAEPN 575
S+L +PN
Sbjct: 109 SLLTDPN 115
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 93.1 bits (221), Expect = 1e-19
Identities = 46/131 (35%), Positives = 72/131 (54%)
Frame = +3
Query: 183 MAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIF 362
M A +R+ EY+ + E + + N N +EW A+I GP+GT +EGG+F + F
Sbjct: 5 MDKKAAQRIAMEYRAMISK--ESLFSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKF 62
Query: 363 PPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKIL 542
P DYP PP F ++HPNI +G +C++IL ++W+P VEK+L
Sbjct: 63 PTDYPFKPPKFTFKTPIYHPNINDEGSICMNIL-------------KDKWTPALMVEKVL 109
Query: 543 WSVVSMLAEPN 575
S++ +L +PN
Sbjct: 110 LSILLLLEKPN 120
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 91.1 bits (216), Expect = 5e-19
Identities = 43/115 (37%), Positives = 64/115 (55%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A +R++ E K L +PP AGP+ E+ F W+A I GP + + GG+F + FPPDY
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAED-MFHWQATIMGPAESPYSGGVFLVTIHFPPDY 60
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKI 539
P PP + F +FHPNI ++G +C+ IL E+WSP ++ K+
Sbjct: 61 PFKPPKVAFRTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKV 102
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 85.4 bits (202), Expect = 2e-17
Identities = 45/132 (34%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +3
Query: 183 MAGSAL-RRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLI 359
MA S L RR++ E ++L P GI A P +EEN + +I GP + +EGG+F +L
Sbjct: 1 MANSNLPRRIIKETQRLLSEPAPGISASP-SEENMRYFNVMILGPTQSPYEGGVFKLELF 59
Query: 360 FPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKI 539
P +YP++ P ++F+ ++HPNI G++C+ IL ++WSP + +
Sbjct: 60 LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTV 106
Query: 540 LWSVVSMLAEPN 575
L S+ ++L+ PN
Sbjct: 107 LLSIQALLSAPN 118
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 84.2 bits (199), Expect = 6e-17
Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
Frame = +3
Query: 183 MAGSAL-RRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLI 359
MA S L RR++ E ++L P GI A P +E+N + +I GP + +EGG+F +L
Sbjct: 1 MANSNLPRRIIKETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELF 59
Query: 360 FPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKI 539
P +YP++ P ++F+ ++HPNI G++C+ IL ++WSP + +
Sbjct: 60 LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL-------------KDKWSPALQIRTV 106
Query: 540 LWSVVSMLAEPN 575
L S+ ++L+ PN
Sbjct: 107 LLSIQALLSAPN 118
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 83.4 bits (197), Expect = 1e-16
Identities = 42/124 (33%), Positives = 66/124 (53%)
Frame = +3
Query: 201 RRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPL 380
+R+ E +L ++PP AGP +N + W A I GP GT +EGGIF +IFP DYP
Sbjct: 39 KRIQREMAELNIDPPPDCSAGP-KGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPF 97
Query: 381 SPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSM 560
PP + F ++H N+ G + ++IL + WSP ++ K+L ++ S+
Sbjct: 98 KPPKLVFKTRIYHCNVDTAGDLSVNILR-------------DSWSPALTITKVLQAIRSI 144
Query: 561 LAEP 572
+P
Sbjct: 145 FLKP 148
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 83.0 bits (196), Expect = 1e-16
Identities = 48/128 (37%), Positives = 64/128 (50%)
Frame = +3
Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
S L+RL +E L + GI A P E+N F W+ ITG + T FEG + L F D
Sbjct: 35 SVLKRLQSELMGLMMGGGPGISAFP-EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSND 93
Query: 372 YPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
YP PP ++F FHPN+ G +C+ IL ++WS V IL S+
Sbjct: 94 YPFKPPKVKFETCCFHPNVDVYGNICLDIL-------------QDKWSSAYDVRTILLSI 140
Query: 552 VSMLAEPN 575
S+L EPN
Sbjct: 141 QSLLGEPN 148
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 81.8 bits (193), Expect = 3e-16
Identities = 49/134 (36%), Positives = 64/134 (47%), Gaps = 4/134 (2%)
Frame = +3
Query: 186 AGSALRRLMAEYKQLTLNPPEGIIAGPINEE----NFFEWEALITGPEGTCFEGGIFPAK 353
+G A RL E K N P G +A P + N W I G GT +EGG FP
Sbjct: 3 SGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLT 62
Query: 354 LIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVE 533
+ F DYP PP +F FHPN+Y G VC+SIL ++ G W P +V+
Sbjct: 63 MHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSIL----NEDYG-------WRPAITVK 111
Query: 534 KILWSVVSMLAEPN 575
+IL + +L PN
Sbjct: 112 QILVGIQDLLDTPN 125
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 80.6 bits (190), Expect = 7e-16
Identities = 47/128 (36%), Positives = 63/128 (49%)
Frame = +3
Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
S L+RL +E L + GI A P E+N F W+ ITG + T FEG + L F D
Sbjct: 36 SVLKRLQSELMGLMMGADPGISAFP-EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSND 94
Query: 372 YPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
YP P ++F FHPN+ G +C+ IL ++WS V IL S+
Sbjct: 95 YPFKSPKVKFETCCFHPNVDLYGNICLDIL-------------QDKWSSAYDVRTILLSI 141
Query: 552 VSMLAEPN 575
S+L EPN
Sbjct: 142 QSLLGEPN 149
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 77.0 bits (181), Expect = 9e-15
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Frame = +3
Query: 204 RLMAEYKQLTLNP-PEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPL 380
RL EYK++ + I ++ N F+W ALI GP T +EGG+F P YPL
Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
Query: 381 SPPXMQFICDMFHPNI-YADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVS 557
PP ++F+ +FHPN+ + G++C+ IL WSP +++ + ++++
Sbjct: 67 QPPQVRFLTKIFHPNVHFKTGEICLDIL-------------KNAWSPAWTLQSVCRAIIA 113
Query: 558 MLAEP 572
++A P
Sbjct: 114 LMAHP 118
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 77.0 bits (181), Expect = 9e-15
Identities = 36/99 (36%), Positives = 60/99 (60%)
Frame = +3
Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
+ +++L E K L +PP+GI +N+E+F + A I GP GT +E G+F KL D
Sbjct: 10 NVIKQLAKELKSLDESPPDGIKV-VVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHD 68
Query: 372 YPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMG 488
+P SPP F+ +FHPN+ ++G++C++ L + +G
Sbjct: 69 FPHSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLG 107
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 75.8 bits (178), Expect = 2e-14
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Frame = +3
Query: 183 MAGSAL-RRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLI 359
MA S L RR++ E ++L P GI A P +E+N + +I GP + +EGG+F +L
Sbjct: 1 MANSNLPRRIIKETQRLLSEPAPGISASP-SEDNMRYFNVMILGPTQSPYEGGVFKLELF 59
Query: 360 FPPDYPLSPPXMQFICDMFHPNIYADGQVCISIL 461
P +YP++ P ++F+ ++HPNI G++C+ IL
Sbjct: 60 LPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL 93
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 73.3 bits (172), Expect = 1e-13
Identities = 46/140 (32%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Frame = +3
Query: 180 AMAGSALRRLMAEYKQLTLNPPEGI----IAGPINEENFFEW----EALITGPEGTCFEG 335
A A R+ E K L +PP G ++ N F +A I GPE T +
Sbjct: 2 AQAARLSLRMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYAN 61
Query: 336 GIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWS 515
GIF K+ P YP PP + F ++HPNI G++C+ IL+ P P G W
Sbjct: 62 GIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLP---PKG------AWQ 112
Query: 516 PVQSVEKILWSVVSMLAEPN 575
P ++ +L S+ +L+EPN
Sbjct: 113 PSLNISTVLTSMRLLLSEPN 132
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 71.7 bits (168), Expect = 3e-13
Identities = 35/99 (35%), Positives = 50/99 (50%)
Frame = +3
Query: 276 ENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCIS 455
EN F WEA + GP G +E G+F + PP YP PP + F +FHPNI G++ +
Sbjct: 57 ENIFRWEATVNGPVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVD 116
Query: 456 ILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSMLAEP 572
IL RWS ++ +L S+ S+L+ P
Sbjct: 117 IL-------------GSRWSSALTINLVLLSICSILSNP 142
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 70.1 bits (164), Expect = 1e-12
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A++R++ E K++ NP + ++ P+ EEN FEW+ I GP T FEGGI+ ++ P DY
Sbjct: 12 AVKRILQEVKEMQANPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIYHGRIQLPADY 70
Query: 375 PLSPPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVV 554
P PP + + + ++C+SI Y E W P SV L +++
Sbjct: 71 PFKPPSFMLLTP--NGRFETNTKICLSI--------SNYH--PEHWQPSWSVRTALVALI 118
Query: 555 S-MLAEPN 575
+ M PN
Sbjct: 119 AFMPTSPN 126
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/95 (30%), Positives = 54/95 (56%)
Frame = +3
Query: 291 WEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNIYADGQVCISILHAP 470
+ +I GP + +EGG+F +L P +YP++ P ++F+ ++HPNI G++C+ IL
Sbjct: 4 FNVMILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDIL--- 60
Query: 471 GDDPMGYESSSERWSPVQSVEKILWSVVSMLAEPN 575
++WSP + +L S+ ++L+ PN
Sbjct: 61 ----------KDKWSPALQIRTVLLSIQALLSAPN 85
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 65.7 bits (153), Expect = 2e-11
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +3
Query: 180 AMAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLI 359
A++ A RL E + LNPP G +N +W +TG GT + + ++
Sbjct: 11 ALSKIACNRLQKELSEWQLNPPTGFRHKVT--DNLQKWTIDVTGAPGTLYANETYQLQVE 68
Query: 360 FPPDYPLSPPXMQFICDM-FHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEK 536
FP YP+ P + F+ HP+IY++G +C+ IL Y+S WSP +V
Sbjct: 69 FPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDIL---------YDS----WSPAMTVNS 115
Query: 537 ILWSVVSMLA 566
+ S++SML+
Sbjct: 116 VCISILSMLS 125
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 64.9 bits (151), Expect = 4e-11
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = +3
Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
+ ++RL EY+ L P ++A P + + EW ++ G EGT F GG + K+ FPP+
Sbjct: 5 ACIKRLQKEYRALCKEPVSHVVARP-SPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 372 YPLSPPXMQFICDMFHPN--IYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILW 545
YP PP + M PN ++C+S+ + E W+P+ SV IL
Sbjct: 64 YPYKPPGI----TMTTPNGRFVTQKKICLSM----------SDFHPESWNPMWSVSSILT 109
Query: 546 SVVSMLAE 569
++S + +
Sbjct: 110 GLLSFMMD 117
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 64.9 bits (151), Expect = 4e-11
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = +3
Query: 192 SALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPD 371
+ ++RL EY+ L P ++A P + + EW ++ G EGT F GG + K+ FPP+
Sbjct: 5 ACIKRLQKEYRALCKEPVSHVVARP-SPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPE 63
Query: 372 YPLSPPXMQFICDMFHPN--IYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILW 545
YP PP + M PN ++C+S+ + E W+P+ SV IL
Sbjct: 64 YPYKPPGI----TMTTPNGRFMTQKKICLSM----------SDFHPESWNPMWSVSSILT 109
Query: 546 SVVSMLAE 569
++S + +
Sbjct: 110 GLLSFMMD 117
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 63.7 bits (148), Expect = 9e-11
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Frame = +3
Query: 180 AMAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLI 359
A++ A RL E + +NPP G +N +W +TG GT + + ++
Sbjct: 11 ALSKIACNRLQKELSEWQVNPPTGFKHRVT--DNLQKWVIEVTGAPGTLYANETYNLQVE 68
Query: 360 FPPDYPLSPPXMQFICDM-FHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEK 536
FP YP+ P + F+ HP+IY++G +C+ IL Y+S WSP +V
Sbjct: 69 FPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDIL---------YDS----WSPAMTVSS 115
Query: 537 ILWSVVSMLA 566
+ S++SML+
Sbjct: 116 VCISILSMLS 125
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 61.3 bits (142), Expect = 5e-10
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 1/124 (0%)
Frame = +3
Query: 204 RLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLS 383
R+ E + N I +N I GP GT +EGG F + P YP
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 384 PPXMQFICDMFHPNIYA-DGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSM 560
PP MQF ++HPNI + G +C+ IL ++WSP +++ L S+ ++
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDIL-------------KDQWSPALTLKTALVSIQAL 112
Query: 561 LAEP 572
L+ P
Sbjct: 113 LSAP 116
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 60.1 bits (139), Expect = 1e-09
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A RL E + +NPP G +N W + G GT + + ++ FP Y
Sbjct: 16 ATNRLQKELVEWQMNPPTGFKHKVT--DNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHY 73
Query: 375 PLSPPXMQFICDM-FHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
P+ P + F+ HP+IY++G +C+ IL Y+S WSP +V I S+
Sbjct: 74 PMESPQVIFLHPAPLHPHIYSNGHICLDIL---------YDS----WSPAMTVSSICISI 120
Query: 552 VSMLAEPND 578
+SML+ +
Sbjct: 121 LSMLSSSTE 129
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 1/125 (0%)
Frame = +3
Query: 195 ALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDY 374
A RL E+ + NPP G +N W + G GT + + ++ FP Y
Sbjct: 16 ATNRLQKEFMEWQTNPPSGFKHRV--SDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHY 73
Query: 375 PLSPPXMQFICDM-FHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSV 551
P+ P + F HP+IY++G +C+ +L Y+S WSP + I S+
Sbjct: 74 PMEAPQVIFQHPAPLHPHIYSNGHICLDVL---------YDS----WSPAMRLSSICLSI 120
Query: 552 VSMLA 566
+SML+
Sbjct: 121 LSMLS 125
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 54.0 bits (124), Expect = 7e-08
Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Frame = +3
Query: 177 SAMAGSALRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKL 356
S + S ++++ E+ L N P I + EE A + G GT + G+F +
Sbjct: 657 SQVTKSWVKKVQQEWSNLEANLPNTIYVR-VCEERMDLLRAALVGAPGTPYHDGLFFFDI 715
Query: 357 IFPPDYPLSPPXMQFICD--MFHPNIYADGQVCISILH 464
+ PP YP PP + + +PN+Y G+VC+S+L+
Sbjct: 716 MLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLN 753
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 50.8 bits (116), Expect = 6e-07
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Frame = +3
Query: 198 LRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYP 377
++++ A++K L + PE I E A+I G EGT + G+F + FP YP
Sbjct: 273 VKKVQADWKILENDLPEAISVRAC-ESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYP 331
Query: 378 LSPPXMQFICD--MFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQS-VEKILWS 548
PP + + +PN+Y G+VC+S+L S+ E+W P +S + ++L S
Sbjct: 332 SVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAG------SAREKWLPNESTMLQLLVS 385
Query: 549 VVSML 563
+ +++
Sbjct: 386 IQALI 390
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +3
Query: 198 LRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYP 377
++ + E+K L N PE I E A+I G EGT + G+F + FP YP
Sbjct: 607 VKDIQKEWKILDKNLPETIFVRAC-ESRIDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYP 665
Query: 378 LSPPXMQFICD--MFHPNIYADGQVCISIL 461
PP + + +PN+Y G+VC+S++
Sbjct: 666 SVPPKVHYHSGGLRINPNLYKCGKVCLSLI 695
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +3
Query: 198 LRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYP 377
++++ E+K L N PE I E A+I G EGT + G+F + FP YP
Sbjct: 919 VKKVQDEWKILNQNLPETIFVRAC-ESRMDLLRAVIIGAEGTPYHDGLFFFDIQFPDTYP 977
Query: 378 LSPPXMQFICD--MFHPNIYADGQVCISI 458
PP + + +PN+Y G+V +SI
Sbjct: 978 SVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 50.4 bits (115), Expect = 8e-07
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +3
Query: 201 RRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPL 380
+++ ++K L N P+GI E+ A+I G GT ++ G+F P DYP
Sbjct: 853 KKVDQDWKILQNNLPDGIFVRAY-EDRMDLLRAVIVGAFGTPYQDGLFFFDFHLPSDYPS 911
Query: 381 SPPXMQFICD--MFHPNIYADGQVCISILH 464
PP + +PN+Y +G+VC+S+L+
Sbjct: 912 VPPSAYYHSGGWRLNPNLYEEGKVCLSLLN 941
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 49.6 bits (113), Expect = 1e-06
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +3
Query: 201 RRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPL 380
+R+ E++ L + PE I E A+I G +GT + G+F + FP YP
Sbjct: 335 KRIQDEWRILEKDLPEMIFVRAY-ESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYPS 393
Query: 381 SPPXMQFICD--MFHPNIYADGQVCISIL 461
+PP + + +PN+Y G+VC+S+L
Sbjct: 394 TPPIVHYHSGGLRINPNLYNCGKVCLSLL 422
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 47.2 bits (107), Expect = 8e-06
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +3
Query: 306 TGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNI-YADGQVCISILH 464
+GP+ + +EGG++ ++ P YP P + FI ++HPN+ G VC+ +++
Sbjct: 37 SGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVIN 90
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/90 (26%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Frame = +3
Query: 198 LRRLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYP 377
++ +M++YK T+N +G+ +E + E+ GP+ + ++GG++ ++ P YP
Sbjct: 13 MKLMMSDYKVETIN--DGM------QEFYVEFN----GPKDSLYQGGVWKIRVELPDAYP 60
Query: 378 LSPPXMQFICDMFHPNI-YADGQVCISILH 464
P + FI ++HPN+ G VC+ +++
Sbjct: 61 YKSPSVGFITKIYHPNVDELSGSVCLDVIN 90
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 45.2 bits (102), Expect = 3e-05
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Frame = +3
Query: 309 GPEGTCFEGGIFPAKLIFPPDYPLSPPXMQFICDMFHPNI-YADGQVCISILH 464
GP + ++GG++ K+ P YP P + F+ ++HPN+ + G VC+ +++
Sbjct: 38 GPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVIN 90
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 43.6 bits (98), Expect = 1e-04
Identities = 32/124 (25%), Positives = 52/124 (41%)
Frame = +3
Query: 204 RLMAEYKQLTLNPPEGIIAGPINEENFFEWEALITGPEGTCFEGGIFPAKLIFPPDYPLS 383
RL + +L L P I+ P + + +E I EG G F YP
Sbjct: 35 RLHKDISELNL-PKSCKISFPNGKNDLMNFEVTIKPDEGYYLSGN-FVFSFQVSNMYPHE 92
Query: 384 PPXMQFICDMFHPNIYADGQVCISILHAPGDDPMGYESSSERWSPVQSVEKILWSVVSML 563
P ++ ++HPNI +G VC++IL E W PV ++ +++ + +
Sbjct: 93 APKVKCKTKVYHPNIDLEGNVCLNILR-------------EDWKPVLNINTVIYGLFHLF 139
Query: 564 AEPN 575
EPN
Sbjct: 140 TEPN 143
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +3
Query: 291 WEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQF 401
W I GP T +EG IF KL DYP SPP ++F
Sbjct: 47 WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRF 83
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 41.1 bits (92), Expect = 5e-04
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = +3
Query: 291 WEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQF 401
W I GP T +EG IF KL +YP SPP ++F
Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRF 83
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 291 WEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQF 401
W I GP T EG I+ KL DYP PP ++F
Sbjct: 49 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRF 85
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 38.7 bits (86), Expect = 0.003
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +3
Query: 291 WEALITGPEGTCFEGGIFPAKLIFPPDYPLSPPXMQF 401
W I GP T EG I+ KL DYP PP ++F
Sbjct: 48 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRF 84
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 34.3 bits (75), Expect = 0.060
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 291 WEALITGPEG-TCFEGGIFPAKLIFPPDYPLSPPXMQF 401
W I GP T EG I+ KL DYP PP ++F
Sbjct: 49 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRF 86
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 34.3 bits (75), Expect = 0.060
Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +3
Query: 291 WEALITGPEG-TCFEGGIFPAKLIFPPDYPLSPPXMQF 401
W I GP T EG I+ KL DYP PP ++F
Sbjct: 48 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRF 85
>At5g61620.1 68418.m07732 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 317
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Frame = +3
Query: 360 FPPDYPLSPPXMQFICDMFHPN---IYADGQVCISILHAPG 473
+ P Y PP F M+HPN YA+ QV + +H G
Sbjct: 224 YMPIYQPIPPYYNFPPIMYHPNYPMYYANPQVPVRFVHPSG 264
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,251,807
Number of Sequences: 28952
Number of extensions: 260258
Number of successful extensions: 762
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1131744440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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