Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L14
         (604 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.5  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    21   6.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.0  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +1

Query: 28  STICSLT-RTWKISFHCSPPYFVFAEAN*SQTTSLTASAVIPSTCKTYSFY 177
           +T+ S T   W ++    PPY + A+   SQ+ +     V   T  TY  Y
Sbjct: 314 TTVMSPTINCWSLTSSPPPPYQISAQPTPSQSPNQIYQPVTNLTNLTYPSY 364


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -3

Query: 119 VWLQFASANTKYGGEQW 69
           VWL  A    KY G  W
Sbjct: 297 VWLDDAQVPYKYDGTNW 313


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +3

Query: 63   KFPLFTAVFRICRGELKPN 119
            ++PL   + R+ RG  KP+
Sbjct: 2178 EYPLLRTINRVLRGYAKPD 2196


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.0
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = +1

Query: 184 VTMSLDSSLDH*KTLSIKIICRIENKLTYYCE*HMYYMYVCFY 312
           V +S+ S   H   + IKI+     + + YC  +   +   FY
Sbjct: 47  VVVSIYSKSFHRNEIHIKIVLMFFKEASLYCFNYYVIVVTTFY 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,416
Number of Sequences: 336
Number of extensions: 2524
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)