Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L14
         (604 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical p...    77   7e-15
Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical pr...    77   7e-15
Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical pr...    77   7e-15
Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical pr...    77   7e-15
Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical pr...    46   2e-05
Z29117-8|CAA82380.1|  196|Caenorhabditis elegans Hypothetical pr...    29   2.6  
AF003740-9|AAC48140.1|  852|Caenorhabditis elegans Hypothetical ...    28   5.9  

>Z22180-10|CAO82052.1|  360|Caenorhabditis elegans Hypothetical
           protein K11H3.1d protein.
          Length = 360

 Score = 77.4 bits (182), Expect = 7e-15
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +3

Query: 3   QGPITAEEVNHMLANKNMENKFPLFTAVFRICRGELKPNDFIDCIRSHPEHM 158
           QGP+TAEEV  M+    ++ KFPLFTAV +IC GE+KP + +DC+R+HPEHM
Sbjct: 309 QGPLTAEEVYLMMHKTGLDAKFPLFTAVHKICAGEMKPAELVDCLRNHPEHM 360


>Z22180-9|CAO82051.1|  304|Caenorhabditis elegans Hypothetical
           protein K11H3.1c protein.
          Length = 304

 Score = 77.4 bits (182), Expect = 7e-15
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +3

Query: 3   QGPITAEEVNHMLANKNMENKFPLFTAVFRICRGELKPNDFIDCIRSHPEHM 158
           QGP+TAEEV  M+    ++ KFPLFTAV +IC GE+KP + +DC+R+HPEHM
Sbjct: 253 QGPLTAEEVYLMMHKTGLDAKFPLFTAVHKICAGEMKPAELVDCLRNHPEHM 304


>Z22180-2|CAD54146.1|  392|Caenorhabditis elegans Hypothetical
           protein K11H3.1b protein.
          Length = 392

 Score = 77.4 bits (182), Expect = 7e-15
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +3

Query: 3   QGPITAEEVNHMLANKNMENKFPLFTAVFRICRGELKPNDFIDCIRSHPEHM 158
           QGP+TAEEV  M+    ++ KFPLFTAV +IC GE+KP + +DC+R+HPEHM
Sbjct: 341 QGPLTAEEVYLMMHKTGLDAKFPLFTAVHKICAGEMKPAELVDCLRNHPEHM 392


>Z22180-1|CAA80176.2|  371|Caenorhabditis elegans Hypothetical
           protein K11H3.1a protein.
          Length = 371

 Score = 77.4 bits (182), Expect = 7e-15
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = +3

Query: 3   QGPITAEEVNHMLANKNMENKFPLFTAVFRICRGELKPNDFIDCIRSHPEHM 158
           QGP+TAEEV  M+    ++ KFPLFTAV +IC GE+KP + +DC+R+HPEHM
Sbjct: 320 QGPLTAEEVYLMMHKTGLDAKFPLFTAVHKICAGEMKPAELVDCLRNHPEHM 371


>Z99171-3|CAB16310.1|  374|Caenorhabditis elegans Hypothetical
           protein F47G4.3 protein.
          Length = 374

 Score = 46.0 bits (104), Expect = 2e-05
 Identities = 19/51 (37%), Positives = 30/51 (58%)
 Frame = +3

Query: 3   QGPITAEEVNHMLANKNMENKFPLFTAVFRICRGELKPNDFIDCIRSHPEH 155
           QGP TA++V  ML    +  KFP+F +V ++  G     +  D +R+HPE+
Sbjct: 323 QGPPTAQDVYEMLEINEISEKFPIFASVHKVFTGHHGEQELYDSLRNHPEY 373


>Z29117-8|CAA82380.1|  196|Caenorhabditis elegans Hypothetical
           protein C48B4.8 protein.
          Length = 196

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 303 YIHIIHMLFTIIS*FVFYSTYYFD 232
           YIH I+ L  I+  F+F  T+Y+D
Sbjct: 84  YIHFIYCLLYIVFSFLFIPTFYYD 107


>AF003740-9|AAC48140.1|  852|Caenorhabditis elegans Hypothetical
           protein C41D11.6 protein.
          Length = 852

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/41 (34%), Positives = 19/41 (46%)
 Frame = -2

Query: 549 HHPHVAELSLVPDVKNPISLGPIPGIEPETSERQSYRNITA 427
           HHP        PD++  IS+      E    + QS+RN TA
Sbjct: 143 HHPFREHYGAQPDLEPKISVAKRLAAETTLEDVQSFRNYTA 183


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,205,512
Number of Sequences: 27780
Number of extensions: 219143
Number of successful extensions: 501
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 501
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)