Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L14
         (604 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    77   2e-16
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    25   0.57 
AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex det...    23   2.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.0  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   5.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   5.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   7.0  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   9.3  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 76.6 bits (180), Expect = 2e-16
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = +3

Query: 3   QGPITAEEVNHMLANKNMENKFPLFTAVFRICRGELKPNDFIDCIRSHPEHM 158
           QGP TAEEVN+ML  KNMEN+FPLFT V RIC GE  P + I+ +R+HPE++
Sbjct: 299 QGPFTAEEVNYMLKAKNMENRFPLFTTVHRICIGETMPMELIENLRNHPEYI 350


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 25.0 bits (52), Expect = 0.57
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 325 STL*NKNIHTYNTYVIHNNK 266
           S+L NK IH  N Y  +NNK
Sbjct: 305 SSLSNKTIHNNNNYNNYNNK 324


>AY569698-1|AAS86651.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -1

Query: 325 STL*NKNIHTYNTYVIHNNK 266
           S+L NK IH  N Y  +N K
Sbjct: 316 SSLSNKTIHNNNNYKNYNKK 335


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 33  HMLANKNM---ENKFPLFTAVFRICRGELKPNDFIDCIRSHPE 152
           H++ N+++   +    +   + ++C G  K ND +  +R H E
Sbjct: 218 HLMFNRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTVRPHLE 260


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 10/43 (23%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
 Frame = +3

Query: 33  HMLANKNM---ENKFPLFTAVFRICRGELKPNDFIDCIRSHPE 152
           H++ N+++   +    +   + ++C G  K ND +  +R H E
Sbjct: 218 HLMFNRDLIIVQTGCTITRVIPQVCSGNCKLNDILLTVRPHLE 260


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 486  PIPGIEPETSERQSYRNITA 427
            P+P +  ++SE +SYR  +A
Sbjct: 1340 PVPRLAQDSSEDESYRGPSA 1359


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 11/21 (52%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
 Frame = -1

Query: 325 STL*NKNIHTYNTYVI-HNNK 266
           S+L NK IH  N Y   +NNK
Sbjct: 83  SSLSNKTIHNNNNYKYNYNNK 103


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 513 DVKNPISLGPIPGIEPETSERQ 448
           D+K  +S G    I PET E +
Sbjct: 303 DIKTELSTGMNDDIPPETEEEE 324


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 154 TCKTYSFYPLVTMSLD 201
           TC T S + LV +S+D
Sbjct: 268 TCSTSSIFNLVAISID 283


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 6/19 (31%), Positives = 13/19 (68%)
 Frame = +3

Query: 261 INLLL*ITYVLYVCMFLFY 317
           +NL+L    + ++C+ +FY
Sbjct: 238 VNLILPTVLISFLCVLVFY 256


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,397
Number of Sequences: 438
Number of extensions: 2999
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)