Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_L13
(240 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC007956-1|AAF61276.1| 823|Homo sapiens KIAA0317 protein. 32 0.37
AB002315-1|BAA20775.2| 826|Homo sapiens KIAA0317 protein. 32 0.37
AF083105-1|AAC83687.1| 890|Homo sapiens HMG box factor SOX-13 p... 29 2.0
AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin ... 28 6.1
BX537849-1|CAD97857.1| 1626|Homo sapiens hypothetical protein pr... 27 8.0
BC053860-1|AAH53860.1| 762|Homo sapiens KLHL5 protein protein. 27 8.0
AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor aprax... 27 8.0
AY172948-1|AAO39710.1| 694|Homo sapiens KLHL5b protein protein. 27 8.0
AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein. 27 8.0
AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein. 27 8.0
AK002174-1|BAA92121.1| 508|Homo sapiens protein ( Homo sapiens ... 27 8.0
AK001698-1|BAA91845.1| 508|Homo sapiens protein ( Homo sapiens ... 27 8.0
AF272976-1|AAL08584.1| 734|Homo sapiens kelch-like 5 protein pr... 27 8.0
AB208820-1|BAD92057.1| 593|Homo sapiens kelch-like 5 isoform 2 ... 27 8.0
>AC007956-1|AAF61276.1| 823|Homo sapiens KIAA0317 protein.
Length = 823
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 186 LPAILRLRVSSREAPPGPVLQAVCRF-VLRAPSHCRTPLAHSCYRTI 49
L +L+ S + PPG F ++ AP+H P AH+C+ +
Sbjct: 748 LARLLQFTTGSSQLPPGGFAALCPSFQIIAAPTHSTLPTAHTCFNQL 794
>AB002315-1|BAA20775.2| 826|Homo sapiens KIAA0317 protein.
Length = 826
Score = 31.9 bits (69), Expect = 0.37
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 186 LPAILRLRVSSREAPPGPVLQAVCRF-VLRAPSHCRTPLAHSCYRTI 49
L +L+ S + PPG F ++ AP+H P AH+C+ +
Sbjct: 751 LARLLQFTTGSSQLPPGGFAALCPSFQIIAAPTHSTLPTAHTCFNQL 797
>AF083105-1|AAC83687.1| 890|Homo sapiens HMG box factor SOX-13
protein.
Length = 890
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +1
Query: 28 CFLLSSTYCPVAGVCERSATM*RCSQHKSTHCLQY 132
CF L YC +A VC R C H HC +Y
Sbjct: 768 CFHLCQAYCALAAVCVRVHV---CVFHLFIHCTRY 799
>AF016692-1|AAB71685.1| 648|Homo sapiens small intestinal mucin
MUC3 protein.
Length = 648
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/55 (34%), Positives = 24/55 (43%)
Frame = -3
Query: 214 PAR*TVACLTSSHIETKSVESGGTSRSCTASSVSICVESTVTLSHSARTLLLPDN 50
PA T A LT + T TSR CT S+ ++ ST S S T P +
Sbjct: 530 PAMTTAAPLTYVTMSTAPSTPRTTSRGCTTSASTLSATSTPHTSTSITTTETPSS 584
>BX537849-1|CAD97857.1| 1626|Homo sapiens hypothetical protein
protein.
Length = 1626
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +2
Query: 83 RQCDGALNTNRHTACSTGPGGASRLDTLSLNMAGSEARHGSTSGITSMR 229
RQC +T GP A L SL+ HG T G+ R
Sbjct: 1275 RQCPEPTSTAEKLGLKKGPRKAYELSQRSLDYVAQLRDHGKTVGVVDTR 1323
>BC053860-1|AAH53860.1| 762|Homo sapiens KLHL5 protein protein.
Length = 762
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 90 VTVLSTQIDTLLAVQDREVPPDSTLLVSIWLEVRHATVQR 209
V + +++I LLA D +P + T+L ++ VRH QR
Sbjct: 366 VLLPASEIAKLLASDDMNIPNEETILNALLTWVRHDLEQR 405
>AY362728-1|AAR13367.1| 2677|Homo sapiens ataxia/oculomotor apraxia
protein 2 protein.
Length = 2677
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +2
Query: 83 RQCDGALNTNRHTACSTGPGGASRLDTLSLNMAGSEARHGSTSGITSMR 229
RQC +T GP A L SL+ HG T G+ R
Sbjct: 1275 RQCPEPTSTAEKLGLKKGPRKAYELSQRSLDYVAQLRDHGKTVGVVDTR 1323
>AY172948-1|AAO39710.1| 694|Homo sapiens KLHL5b protein protein.
Length = 694
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 90 VTVLSTQIDTLLAVQDREVPPDSTLLVSIWLEVRHATVQR 209
V + +++I LLA D +P + T+L ++ VRH QR
Sbjct: 298 VLLPASEIAKLLASDDMNIPNEETILNALLTWVRHDLEQR 337
>AL353701-2|CAM14151.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +2
Query: 83 RQCDGALNTNRHTACSTGPGGASRLDTLSLNMAGSEARHGSTSGITSMR 229
RQC +T GP A L SL+ HG T G+ R
Sbjct: 1275 RQCPEPTSTAEKLGLKKGPRKAYELSQRSLDYVAQLRDHGKTVGVVDTR 1323
>AL159997-2|CAI40854.1| 2677|Homo sapiens senataxin protein.
Length = 2677
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/49 (30%), Positives = 18/49 (36%)
Frame = +2
Query: 83 RQCDGALNTNRHTACSTGPGGASRLDTLSLNMAGSEARHGSTSGITSMR 229
RQC +T GP A L SL+ HG T G+ R
Sbjct: 1275 RQCPEPTSTAEKLGLKKGPRKAYELSQRSLDYVAQLRDHGKTVGVVDTR 1323
>AK002174-1|BAA92121.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ11312 fis, clone PLACE1010105, weakly similar to
RING CANAL PROTEIN. ).
Length = 508
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 90 VTVLSTQIDTLLAVQDREVPPDSTLLVSIWLEVRHATVQR 209
V + +++I LLA D +P + T+L ++ VRH QR
Sbjct: 112 VLLPASEIAKLLASDDMNIPNEETILNALLTWVRHDLEQR 151
>AK001698-1|BAA91845.1| 508|Homo sapiens protein ( Homo sapiens
cDNA FLJ10836 fis, clone NT2RP4001228, weakly similar to
RING CANAL PROTEIN. ).
Length = 508
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 90 VTVLSTQIDTLLAVQDREVPPDSTLLVSIWLEVRHATVQR 209
V + +++I LLA D +P + T+L ++ VRH QR
Sbjct: 112 VLLPASEIAKLLASDDMNIPNEETILNALLTWVRHDLEQR 151
>AF272976-1|AAL08584.1| 734|Homo sapiens kelch-like 5 protein
protein.
Length = 734
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 90 VTVLSTQIDTLLAVQDREVPPDSTLLVSIWLEVRHATVQR 209
V + +++I LLA D +P + T+L ++ VRH QR
Sbjct: 359 VLLPASEIAKLLASDDMNIPNEETILNALLTWVRHDLEQR 398
>AB208820-1|BAD92057.1| 593|Homo sapiens kelch-like 5 isoform 2
variant protein.
Length = 593
Score = 27.5 bits (58), Expect = 8.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 90 VTVLSTQIDTLLAVQDREVPPDSTLLVSIWLEVRHATVQR 209
V + +++I LLA D +P + T+L ++ VRH QR
Sbjct: 197 VLLPASEIAKLLASDDMNIPNEETILNALLTWVRHDLEQR 236
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,282,528
Number of Sequences: 237096
Number of extensions: 830210
Number of successful extensions: 5652
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 5607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5652
length of database: 76,859,062
effective HSP length: 58
effective length of database: 63,107,494
effective search space used: 1325257374
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -