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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L13
         (240 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g36840.1 68415.m04518 ACT domain-containing protein contains ...    28   1.00 
At2g39620.1 68415.m04857 pentatricopeptide (PPR) repeat-containi...    27   1.3  
At5g23140.1 68418.m02706 ATP-dependent Clp protease proteolytic ...    27   1.7  
At4g32640.1 68417.m04646 sec23/sec24 transport protein-related         27   2.3  
At4g14170.1 68417.m02188 pentatricopeptide (PPR) repeat-containi...    27   2.3  
At5g18650.1 68418.m02214 zinc finger (C3HC4-type RING finger) fa...    25   5.3  
At5g01060.1 68418.m00009 protein kinase family protein contains ...    25   5.3  
At1g71220.1 68414.m08219 UDP-glucose:glycoprotein glucosyltransf...    25   5.3  
At3g01170.1 68416.m00021 expressed protein                             25   7.0  
At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to...    25   7.0  
At1g66910.1 68414.m07604 protein kinase, putative similar to rec...    25   7.0  
At1g11390.1 68414.m01308 ABC1 family protein contains Pfam domai...    25   7.0  
At3g02830.1 68416.m00275 zinc finger (CCCH-type) family protein ...    25   9.3  
At2g48160.1 68415.m06031 PWWP domain-containing protein                25   9.3  
At1g51860.1 68414.m05846 leucine-rich repeat protein kinase, put...    25   9.3  

>At2g36840.1 68415.m04518 ACT domain-containing protein contains
           Pfam profile ACT domain PF01842
          Length = 410

 Score = 27.9 bits (59), Expect = 1.00
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
 Frame = -3

Query: 196 ACLTSSHI-ET---KSVESGGTSRSCTASSVSICVESTVTLSHSARTLLLPDNK*MIVKN 29
           AC TSS + ET     V    +S   T+S+VSI V+++++ +H+   +   D+K ++   
Sbjct: 201 ACSTSSSVAETLFSSDVSGEHSSGLHTSSNVSIAVDNSLSSAHTLIHITCQDHKGLLYDI 260

Query: 28  RETARD 11
             T +D
Sbjct: 261 MRTFKD 266


>At2g39620.1 68415.m04857 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 836

 Score = 27.5 bits (58), Expect = 1.3
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +3

Query: 102 STQIDTLLAVQDREVPPDSTLLVSIWLEVRHATVQRAG 215
           S  +   L++Q+ E+ PDS   +S+    RHA +   G
Sbjct: 687 SCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEG 724


>At5g23140.1 68418.m02706 ATP-dependent Clp protease proteolytic
           subunit, putative nClpP2/nClpP7; similar to SP:Q9X6W8
           ATP-dependent Clp protease proteolytic subunit (EC
           3.4.21.92) (Endopeptidase Clp) from [Azospirillum
           brasilense]
          Length = 241

 Score = 27.1 bits (57), Expect = 1.7
 Identities = 14/61 (22%), Positives = 28/61 (45%)
 Frame = +3

Query: 42  IYLLSGSRSVRAECDNVTVLSTQIDTLLAVQDREVPPDSTLLVSIWLEVRHATVQRAGSP 221
           + L +G++  R    N TV+  Q     + Q +++   +  +V +W  +    V+  G P
Sbjct: 131 LLLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQP 190

Query: 222 L 224
           L
Sbjct: 191 L 191


>At4g32640.1 68417.m04646 sec23/sec24 transport protein-related
          Length = 1069

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -1

Query: 231 SRIEVIPLVEPWRASLPAILRLRVSSREAPPGPVLQAVCRFVLRAPSHC 85
           SRI+   +  P  +S P +   R S++  PP P   A   +V+R   +C
Sbjct: 329 SRIDPNQIPRPGSSSSPTVFETRQSNQANPPPP---ATSDYVVRDTGNC 374


>At4g14170.1 68417.m02188 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 458

 Score = 26.6 bits (56), Expect = 2.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -1

Query: 207 VEPWRASLPAILRLRVSSREAPPGPVLQAVC 115
           V P   +LP ILR   +SREA  G ++  +C
Sbjct: 111 VRPDDFTLPLILRACSASREAKSGDLIHVLC 141


>At5g18650.1 68418.m02214 zinc finger (C3HC4-type RING finger)
           family protein contains Pfam domain PF00097: Zinc
           finger, C3HC4 type (RING finger)
          Length = 267

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
 Frame = -2

Query: 161 CRVGRHLPVLYCKQC-----VDLC*EHRHIV-ALRSHTPATGQ*VDDSKKQRN 21
           CRVG      +CK+C     V L   HR +  ++R H P   + + DS K  N
Sbjct: 116 CRVGGRENFFHCKKCGSCYAVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTN 168


>At5g01060.1 68418.m00009 protein kinase family protein contains
           eukaryotic protein kinase domain, INTERPRO:IPR000719
          Length = 499

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -1

Query: 210 LVEPWRASLPAILRLRVSSREAPPGPVLQAVCRFVLRAPSHCRTPLAH 67
           + E +  +L   ++ +V+S E P    LQA C F L   +  +  L H
Sbjct: 445 MTEMFSEALSDAMQAQVASPEWPIPLYLQAACLFKLEMEAEAKEALRH 492


>At1g71220.1 68414.m08219 UDP-glucose:glycoprotein
           glucosyltransferase, putative similar to
           UDP-glucose:glycoprotein glucosyltransferase precursor
           GB:Q09332 [SP|Q09332] from Drosophila melanogaster,
           [gi:7670746] and [gi:11346464] from Homo sapiens
          Length = 1673

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 207 VEPWRASLPAILRLRVSSREAPPGPVL 127
           ++ W AS PA + L VS  +A  GP L
Sbjct: 159 LQSWLASAPACISLDVSVGDAVQGPEL 185


>At3g01170.1 68416.m00021 expressed protein
          Length = 215

 Score = 25.0 bits (52), Expect = 7.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +3

Query: 168 VSIWLEVRHATVQRAGSPLC 227
           +S WL +   T+QR G P C
Sbjct: 114 ISTWLVILLCTMQRCGKPNC 133


>At1g69850.1 68414.m08039 nitrate transporter (NTL1) identical to
           nitrate transporter (NTL1) GI:3377517 [Arabidopsis
           thaliana]
          Length = 585

 Score = 25.0 bits (52), Expect = 7.0
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 21  VSLFFTIIYLLSGSRSVRAECDNVTVLSTQIDTLLA 128
           +++F +I+  LSGSR  R +    + L+T +  LLA
Sbjct: 221 IAIFVSILIFLSGSRFYRNKIPCGSPLTTILKVLLA 256


>At1g66910.1 68414.m07604 protein kinase, putative similar to
           receptor serine/threonine kinase PR5K
           gi|1235680|gb|AAC49208
          Length = 666

 Score = 25.0 bits (52), Expect = 7.0
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = -1

Query: 207 VEPWRASLPAILRL------RVSSREAPPGPVLQAVCRFVLRAPS 91
           ++PW    PA+ R+       + + E PP PVLQ +    L+  S
Sbjct: 604 IQPWPLDRPAMNRVVEMMEGNLDALEVPPRPVLQQIPTATLQESS 648


>At1g11390.1 68414.m01308 ABC1 family protein contains Pfam domain,
           PF03109: ABC1 family
          Length = 624

 Score = 25.0 bits (52), Expect = 7.0
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 174 IWLEVRHATVQRAG 215
           IWLE+ H T++RAG
Sbjct: 211 IWLEMVHRTLERAG 224


>At3g02830.1 68416.m00275 zinc finger (CCCH-type) family protein
           contains Pfam domain, PF00642: Zinc finger
           C-x8-C-x5-C-x3-H type (and similar)
          Length = 397

 Score = 24.6 bits (51), Expect = 9.3
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 132 QDREVPPDSTLLVSIWLEVRHATVQRAGSPLC 227
           +DR+ PP   LL SI L +      R G PLC
Sbjct: 301 RDRQAPPPDCLLSSIGLPL------RPGEPLC 326


>At2g48160.1 68415.m06031 PWWP domain-containing protein
          Length = 1366

 Score = 24.6 bits (51), Expect = 9.3
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +2

Query: 92  DGALNTNRHTACSTGPGGASRLDTLSLNMAGSEARHGS 205
           DGAL   +    S+G   +  + T SLN  GS+  + S
Sbjct: 260 DGALRREKRIRRSSGHSESDDVATSSLNSHGSDEENAS 297


>At1g51860.1 68414.m05846 leucine-rich repeat protein kinase,
           putative similar to light repressible receptor protein
           kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
           contains leucine rich repeat (LRR) domains,
           Pfam:PF00560; contains protein kinase domain,
           Pfam:PF00069
          Length = 890

 Score = 24.6 bits (51), Expect = 9.3
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 125 CSTGPGGASRLDTLSLNMAGSEARHGSTSGITSMRLL 235
           CS      SR+  +SLN+ GSE     TS I+ + LL
Sbjct: 403 CSYPDSEGSRI--ISLNLNGSELTGSITSDISKLTLL 437


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,685,028
Number of Sequences: 28952
Number of extensions: 104625
Number of successful extensions: 305
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 12,070,560
effective HSP length: 58
effective length of database: 10,391,344
effective search space used: 218218224
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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