Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_L11
         (380 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    23   1.0  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    21   5.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   5.5  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    20   9.6  

>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 234 VLPLPLIRWPKI 199
           ++ +PL RWPKI
Sbjct: 13  IILIPLFRWPKI 24


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +1

Query: 205 WPPNQRQREDCEVIN 249
           W PN    EDC  +N
Sbjct: 3   WNPNTNISEDCLYLN 17


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 5/19 (26%), Positives = 11/19 (57%)
 Frame = +2

Query: 104 IVFVITRSYVWIIIKMMKF 160
           ++F+    + W+II M  +
Sbjct: 97  LIFIFVNVFFWVIILMSNY 115


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 244 INFKKLNSQEVYQAGNN 294
           +NF KL+  EV   GN+
Sbjct: 136 VNFMKLDEIEVKVTGND 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,792
Number of Sequences: 336
Number of extensions: 1778
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  7908675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)